Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C07
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592...    29   5.0  
08_01_0317 - 2807275-2807487,2807573-2807737,2807818-2807987,280...    28   8.8  

>02_05_1067 -
           33858215-33858321,33858422-33858527,33859014-33859218,
           33859463-33859650,33859780-33859957,33860201-33860298,
           33860619-33860873,33861002-33861236,33861846-33861973
          Length = 499

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 213 TL*PIFSRSLKKLPGAAETEAVAKTIANTK 124
           TL P+FS +LKKL  + E+EA  K+ +  K
Sbjct: 457 TLRPVFSSALKKLEESLESEATKKSKSGDK 486


>08_01_0317 -
           2807275-2807487,2807573-2807737,2807818-2807987,
           2808256-2808724,2810581-2810727,2810968-2810976,
           2811054-2811890
          Length = 669

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 18  ISL*GIP*DFDSVRCSSYVEFRFRENTK*NSRKFSFSCSLLFSPRLRSRQLPAT--SSRI 191
           +S+ G P  F+SV  S  V F+F  N    ++KFS  C +L    L S  +  T  SS  
Sbjct: 130 LSIDGYPFAFNSVHLSKLVLFKFTVNDC-FAKKFSSGCPVLKDLVLISCGIDVTMFSSTT 188

Query: 192 LKKWV 206
           LK +V
Sbjct: 189 LKSFV 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,693,219
Number of Sequences: 37544
Number of extensions: 136353
Number of successful extensions: 333
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)