Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C07
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063007-5|AAD47125.1|  712|Caenorhabditis elegans Prion-like-(q...    30   2.6  
AF016446-13|AAC24172.1|  349|Caenorhabditis elegans Seven tm rec...    28   7.9  

>AF063007-5|AAD47125.1|  712|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 59
           protein.
          Length = 712

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 174 PGAAETEAVAKTIANTKTKIFENFILYFREIETQRTSCNELNQNLK 37
           P    TE+ A +I+N    IF +  +  +++E +RTS    + NLK
Sbjct: 387 PQLPSTESSAASISNASENIFNSSRIMPKQVEPERTSIPNGDYNLK 432


>AF016446-13|AAC24172.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 211 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 328 NIINVVTFCGI-I*ALSLSESFCFCQ--GVDCWSRADDGVSNPLTHF 197
           N+I   +F GI + ++S++ S  F    G+ CW R D   S+  THF
Sbjct: 197 NVIYWPSFIGIMLDSMSINISLMFSAYFGIKCWLRMDAIFSSSSTHF 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,957,172
Number of Sequences: 27780
Number of extensions: 132978
Number of successful extensions: 338
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)