Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_C06
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0652 - 5278178-5278388,5279118-5279197,5279198-5279271,527...    30   3.0  
04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227     30   3.0  
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638...    30   3.0  
05_07_0142 - 27993797-27994037,27994235-27994304,27994429-279944...    29   5.3  
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975...    29   7.0  

>11_01_0652 -
           5278178-5278388,5279118-5279197,5279198-5279271,
           5279721-5279787,5279972-5280034,5280288-5281442
          Length = 549

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = +2

Query: 722 KPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRIVDI 898
           K S+ L HL+  A PD     L  V  SR   ++  VVAS P+L    A  +A RI  +
Sbjct: 62  KASKKLSHLRSPAKPDAVLAVLSGVGLSR--ADLAAVVASDPQLLCARADNIARRIASL 118


>04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227
          Length = 227

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 529 AIYASEGKLAFDLRKPHLRFFRPEGRHSYRHSAH 428
           A Y ++G+ A+D+RKP LR  +P+  H + H  H
Sbjct: 136 AKYYADGEDAYDMRKP-LRQPQPKKHHHHHHHHH 168


>04_04_1268 -
           32262994-32263017,32263411-32263488,32263653-32263800,
           32263890-32264127,32264210-32264420,32264499-32264680,
           32264765-32264866,32265009-32266317,32266906-32266988,
           32267436-32267559
          Length = 832

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 708 SWEIESRANSYNIYSTWPDRTFRATFYGRCGPVGY 812
           SW + S  +S+ IYS  P        YG CGP GY
Sbjct: 349 SWNVNS--SSWAIYSQRPAAIGDCDPYGSCGPFGY 381


>05_07_0142 -
           27993797-27994037,27994235-27994304,27994429-27994493,
           27994633-27994728,27995275-27995421,27995499-27995623
          Length = 247

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -1

Query: 506 IGLRLAQTT--PPVLQARRAALVQTLGSPLSSAL 411
           I LRLA  T  PPVL   R + V+  GSP ++AL
Sbjct: 3   ISLRLAVPTAAPPVLPPLRQSAVRAAGSPAAAAL 36


>09_06_0198 -
           21496692-21496991,21497111-21497258,21497341-21497578,
           21497679-21497889,21497977-21498170,21498263-21498364,
           21498525-21499879,21501193-21501494,21501600-21501750,
           21501838-21502102,21502155-21502362,21502467-21502660,
           21502749-21502850,21503481-21503680,21504010-21504846,
           21505806-21506107,21506209-21506359,21506447-21506684,
           21506764-21506971,21507078-21507271,21507322-21507462,
           21513484-21514811,21515923-21516227,21516331-21516481,
           21516570-21516807,21516881-21517088,21517197-21517366,
           21517451-21517549,21517708-21519029,21521601-21521683
          Length = 3314

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 705 RSWEIESRANSYNIYSTWPDRTFRATFYGRCGPVGY 812
           +SW+  S A  + +   WP  T+    YG CGP GY
Sbjct: 303 QSWDNSSSA--WAVLGEWP--TWDCNRYGYCGPFGY 334


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,931,410
Number of Sequences: 37544
Number of extensions: 480952
Number of successful extensions: 1209
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)