Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_C06
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 30 2.7
Z77663-2|CAB01209.1| 215|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 29 3.6
AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical pr... 29 6.3
L23648-14|AAM48527.1| 573|Caenorhabditis elegans Dipeptidyl pep... 29 6.3
L23648-13|AAM48525.1| 740|Caenorhabditis elegans Dipeptidyl pep... 29 6.3
AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin d... 29 6.3
AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin d... 29 6.3
AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin s... 29 6.3
AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin s... 29 6.3
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 28 8.3
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/65 (27%), Positives = 39/65 (60%)
Frame = +2
Query: 563 LNQEYARVMKDLLTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEELGDRKPSQFLQ 742
L + V +DL TA M+KYK+ + + I+++ E++ ++L+ EE+ ++ S+ ++
Sbjct: 254 LEMNFETVYQDLQTANDNMEKYKSSESERIQKLL---EEQKAEILKEEEIKRKELSEQIK 310
Query: 743 HLQYL 757
+Q L
Sbjct: 311 KIQEL 315
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 701 HEELGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELA 880
H E+ R +F+ L + + D LR + S N++ + ASQ K+ E AELA
Sbjct: 175 HNEITARFNERFILSLASCSSVLVLDDQLRVLPISSHIENVEAIPASQKKIQSESDAELA 234
Query: 881 DRIVDIVQPSTPV 919
+ + ++ + P+
Sbjct: 235 S-LKEAMKETKPI 246
>Z77663-2|CAB01209.1| 215|Caenorhabditis elegans Hypothetical
protein F53F4.2 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 596 LLTAPPLMDKYKTFKE--QLIRRITVSREKKTLQLLQHEELGDRKPSQFLQHLQYLAG 763
+++ P ++D +E Q++ + R K + ++ L +KP+ FL HL+Y +G
Sbjct: 1 MVSDPEMVDPENVDQESHQILNPWCLKRNMKRAEQSTYKTLKFQKPTSFLNHLKYTSG 58
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 824 VCLQVTDWSTPSVESRSECPVRPSTVDVVG 735
+C V DW T +V + +C PST++++G
Sbjct: 210 ICEDVVDWKTKTVTATCKC---PSTIELIG 236
>AC024869-1|AAK68604.2| 357|Caenorhabditis elegans Hypothetical
protein Y75B7AL.2 protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +2
Query: 533 STMYHTVSSQLNQEYARVMKDLLTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEEL 712
+T+ T ++ EY V+ P D +KT +++ R+TV+++ LQ + +
Sbjct: 132 ATVERTAIGEMQSEYEIVLCSSHNVPFDEDFHKTASSRILERLTVTKKTNRLQTVFKATI 191
Query: 713 GDRKPSQFLQHL 748
K + +Q L
Sbjct: 192 FSSKIDRTIQTL 203
>Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical
protein T24D1.1b protein.
Length = 734
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 272 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 331
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 332 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 388
Query: 890 VDI 898
+
Sbjct: 389 TQL 391
>Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical
protein T24D1.1a protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 146 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 205
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 206 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 262
Query: 890 VDI 898
+
Sbjct: 263 TQL 265
>L23648-14|AAM48527.1| 573|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 6, isoform c protein.
Length = 573
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -2
Query: 274 NCRYVQESNPNG----VRPQANRCR*IKRNNTRNSYILRQHDTLQIIKKLTRHKTND 116
N R E P+G RP++N NT Y+ QHD I +T K+N+
Sbjct: 187 NVRLASEEGPDGEMIYYRPRSNEGARTTEQNTWVEYLRIQHDDKAITMPITFDKSNN 243
>L23648-13|AAM48525.1| 740|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 6, isoform a protein.
Length = 740
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -2
Query: 274 NCRYVQESNPNG----VRPQANRCR*IKRNNTRNSYILRQHDTLQIIKKLTRHKTND 116
N R E P+G RP++N NT Y+ QHD I +T K+N+
Sbjct: 187 NVRLASEEGPDGEMIYYRPRSNEGARTTEQNTWVEYLRIQHDDKAITMPITFDKSNN 243
>AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 734
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 272 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 331
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 332 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 388
Query: 890 VDI 898
+
Sbjct: 389 TQL 391
>AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 736
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 274 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 333
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 334 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 390
Query: 890 VDI 898
+
Sbjct: 391 TQL 393
>AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin
synthase-S protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 253 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 312
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 313 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 369
Query: 890 VDI 898
+
Sbjct: 370 TQL 372
>AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin
synthase protein.
Length = 726
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 539 MYHTVSSQLNQEYARVMKDL---LTAPPLMDKYKTFKEQLIRRITVSREKKTLQLLQHEE 709
++H S + + YA+ MK+L +T P+ D K L R RE + + L E
Sbjct: 264 LFHNNQSAIKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSE 323
Query: 710 LGDRKPSQFLQHLQYLAGPDIPSDFLRTVWTSRLPVNIQTVVASQPKLNLEXAAELADRI 889
L K ++ P +++ +++ V + ++L E+AD I
Sbjct: 324 LSTAKAQTLVRMTPNRTNDLTPWEYIN---NNKILFCADRVNCPRHTVDLSIRTEMADTI 380
Query: 890 VDI 898
+
Sbjct: 381 TQL 383
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 270 QLVG*YLIITRYIGDPDVIVDRRASWLPKKIRAARRLAKIPAVAEKPQGRTQ 425
Q+ ++ T Y GD VIVDR+ + +A RL K ++ + P + Q
Sbjct: 126 QIANGHIFSTTYGGDI-VIVDRKGKETKLAVNSANRLLKCISIVKAPSKKNQ 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,909,431
Number of Sequences: 27780
Number of extensions: 400156
Number of successful extensions: 1230
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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