Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_B23
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.1  
05_01_0027 + 178942-179055,179140-179253                               29   6.6  
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    28   8.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
07_01_1201 - 11419851-11419913,11420090-11420311                       28   8.7  

>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 628 RGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 500
           R  SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 22  RVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>05_01_0027 + 178942-179055,179140-179253
          Length = 75

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 539 EHHKNRRSSQRWRNPTGL*RYQAFPPGSSPRALSCFRPCRL-PDTCPPFSL 688
           E H+ R   +RWR      R   FPP  +    SC RPC L P T P F+L
Sbjct: 7   EGHR-RAGCRRWREGMAEAR---FPP-KAYLCDSCLRPCTLHPTTIPAFAL 52


>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 560 SSQRWRNPTGL*RYQAFPPGSSPRALSCFRPCRLPD 667
           SS+ + +P G+  +  FP  S P A S ++P  LP+
Sbjct: 22  SSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 283 NESAN---ARGEAVCVLGALPLPRSLTRCAR 366
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 566 QRWRN--PTGL*RYQAFPPGSSPRALSCFRPC--RLPDTCPPFSLREAWRFLIAHAVGIS 733
           Q+WR+  PTG   + +FP G+ P A    +P   R P T P F  R A      + + + 
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSRVAEGLFGLNGIEVG 85

Query: 734 VRCRSFAP 757
           +   +F P
Sbjct: 86  IEGDNFTP 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,878,501
Number of Sequences: 37544
Number of extensions: 536786
Number of successful extensions: 1664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)