Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B18
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.25
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.3
08_01_0395 - 3502750-3503033,3504844-3505663 31 1.8
07_01_0080 + 587674-588510 29 4.1
06_03_1172 - 28147957-28148274,28149362-28149877 29 4.1
07_03_1125 - 24162298-24162586,24162730-24162783,24162940-241630... 29 5.4
12_01_0580 + 4745639-4746528,4746666-4746747 29 7.1
11_04_0329 - 16442298-16443734 29 7.1
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 7.1
07_03_1136 + 24218601-24218734,24218769-24219906 28 9.4
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PPK G P PP KG PPPPP
Sbjct: 338 PPPPK-----GPPPPPPAKGPPPPPP 358
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PPK P PP KG PPPPP
Sbjct: 329 PPPPK-----AAPPPPPPKGPPPPPP 349
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 623 GXPXPPKXFFXXGGPXXPPXKGXPPPPP 540
G P PP G P PP KG PPPP
Sbjct: 343 GPPPPPPA---KGPPPPPPPKGPSPPPP 367
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PP P PP K PPPPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PPK P PP PPPPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPP 341
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -1
Query: 623 GXPXPPKXFFXXGGPXXPPX--KGXPPPPP 540
G P PP P PP KG PPPPP
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PP GGP PP KG PP
Sbjct: 365 PPPPPPGGKKGGPPPPPPKGGASRPP 390
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PP+ GGP PP PP PP
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPP 1211
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -1
Query: 626 GGXPXPPKXFFXXGGPXXPPXKGX--PPPPP 540
GG P PP GG P G PPPPP
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPP 1188
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -1
Query: 623 GXPXPPKXFFXXGGPXXPP-XKGXPPPP 543
G P PP GGP PP +G P PP
Sbjct: 1203 GAPAPPMPPGVPGGPPPPPGGRGLPAPP 1230
>08_01_0395 - 3502750-3503033,3504844-3505663
Length = 367
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 541 GGGGGXPXXGGXXGPPXKKKXXGGXG 618
GGGGG G PP KK GG G
Sbjct: 46 GGGGGSSRAGSEQPPPGKKSRGGGGG 71
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PP G P PP PPPPP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPP 117
>06_03_1172 - 28147957-28148274,28149362-28149877
Length = 277
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 626 GGXPXPPKXFFXXGGPXXPPXKGXPPPPP 540
GG P PP P PP PPPPP
Sbjct: 8 GGAPPPPPPSPPSVYPFLPPATFIPPPPP 36
>07_03_1125 -
24162298-24162586,24162730-24162783,24162940-24163035,
24163149-24163190,24163688-24163756,24164262-24164284
Length = 190
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 381 HQLEKRACVNSKVSVTLCISVRIRPMCRNDCRSPCSLRK 265
HQ++K + V + L IS+ I P ND CS R+
Sbjct: 128 HQVDKDSLVRKQALYILRISLDIFPSSENDAAQQCSRRR 166
>12_01_0580 + 4745639-4746528,4746666-4746747
Length = 323
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 83 VAIGAFPNHGLSLRCVLDVSHE**ANNEADMRAGFWQFGPXFRLH 217
+ +GA+P H L LRCV ++S E +++A W RLH
Sbjct: 279 ITVGAYPGHRLQLRCV-ELSRE----KFGEVKARVWWEENKARLH 318
>11_04_0329 - 16442298-16443734
Length = 478
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 88 DRCFS*PRAFSSLRAXXXXXXXXXXXXXYASRLLAIRALXSPTLSYTRTIRRRRSVKNSF 267
DRC + PRA +++ A ASRLLA A SP + R + NSF
Sbjct: 26 DRCAT-PRALAAVHAAMLVSGRLADDAFAASRLLAAHAALSPPGAVLRLLASLPCAPNSF 84
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 587 GGPXXPPXKGXPPPPP 540
GGP PP PPPPP
Sbjct: 262 GGPPRPPPPQVPPPPP 277
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 541 GGGGGXPXXGGXXGPPXKKKXXGGXG 618
GGG P GG GPP GG G
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGG 128
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 617 PXPPKXFFXXGGPXXPPXKGXPPPPP 540
P PP GP PP PPP P
Sbjct: 634 PVPPPSMANGAGPVPPPIAVAPPPAP 659
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,858
Number of Sequences: 37544
Number of extensions: 339964
Number of successful extensions: 3168
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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