Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B17
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 240 8e-64
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 106 2e-23
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 106 2e-23
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 102 4e-22
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 101 5e-22
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 96 3e-20
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 96 3e-20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 93 2e-19
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 77 1e-14
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 77 2e-14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 77 2e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 73 4e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 73 4e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 71 1e-12
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 70 2e-12
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 64 2e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 64 2e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 64 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 61 1e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 59 4e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 59 4e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 59 5e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 55 6e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 55 6e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 1e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 53 2e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 53 2e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 53 2e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 50 2e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 47 2e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 28 7.8
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 28 7.8
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 240 bits (588), Expect = 8e-64
Identities = 108/155 (69%), Positives = 132/155 (85%)
Frame = +2
Query: 377 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 556
D WK+ L +P KDRR KT+DVTDT+G EFE+FCL R+LLMGIFEKGWEKPSPIQEASI
Sbjct: 16 DENWKAGLNLPAKDRRFKTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIG 75
Query: 557 IALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 736
+AL+G+D+LARAKNGTG TGAYCIPV+E++ P IQA+++VPTRELALQTSQIC+EL+
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 737 KHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAPLG 841
KH ++VMVTTGGT+LRDDIMR+ V ++IA G
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPG 170
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 106 bits (255), Expect = 2e-23
Identities = 47/126 (37%), Positives = 83/126 (65%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTG T + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 644 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 823
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD ++ + V
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Query: 824 IIAPLG 841
++ G
Sbjct: 151 VVGTPG 156
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 106 bits (255), Expect = 2e-23
Identities = 47/126 (37%), Positives = 83/126 (65%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTG T + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 644 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 823
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ GGT++RDD ++ + V
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Query: 824 IIAPLG 841
++ G
Sbjct: 151 VVGTPG 156
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 102 bits (244), Expect = 4e-22
Identities = 48/121 (39%), Positives = 78/121 (64%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F++ L+ +LL GI+ G+EKPS IQ+ +IP L +DV+A+A++GTG T + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 644 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 823
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++ V
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 824 I 826
+
Sbjct: 148 V 148
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 101 bits (243), Expect = 5e-22
Identities = 47/121 (38%), Positives = 78/121 (64%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F++ L+ +LL GI+ G+EKPS IQ+ ++P L +DV+A+A++GTG T + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 644 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 823
+D + QALI+ PTRELA+Q ++ + L + +++ GGTNL +DI ++ V
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
Query: 824 I 826
+
Sbjct: 148 V 148
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/127 (36%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+G T A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 644 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 820
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 821 VIIAPLG 841
+++A G
Sbjct: 146 ILLATPG 152
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/127 (36%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+G T A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 644 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 820
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 821 VIIAPLG 841
+++A G
Sbjct: 146 ILLATPG 152
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Frame = +2
Query: 446 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAY 622
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTG T A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 623 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 793
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 794 IMRIYQNVQVIIAPLG 841
+ V++A G
Sbjct: 263 EAALRSGPDVVVATPG 278
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 89.4 bits (212), Expect = 3e-18
Identities = 48/139 (34%), Positives = 70/139 (50%)
Frame = +2
Query: 425 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 604
I+ D D + F E + + L GW KPS IQ+A++P AL GKDV+ A+ G+
Sbjct: 33 IEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGS 92
Query: 605 GXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 784
G TGA+ IPVL+ + L++ PTRELA Q Q L + V GG ++
Sbjct: 93 GKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
Query: 785 RDDIMRIYQNVQVIIAPLG 841
M + + +I+A G
Sbjct: 153 AAQAMALARRPHIIVATPG 171
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 416 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 595
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 596 NGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 772
+G G T + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 773 GTNLRDDIMRIYQNVQVII 829
G ++ D R+ + I+
Sbjct: 147 GMAIKKDEERLANDCPHIV 165
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 416 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 595
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 27 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 86
Query: 596 NGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 772
+G G T + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 87 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 146
Query: 773 GTNLRDDIMRIYQNVQVII 829
G ++ D R+ + I+
Sbjct: 147 GMAIKKDEERLANDCPHIV 165
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 416 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 595
D R + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK
Sbjct: 26 DARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAK 85
Query: 596 NGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTG 772
+G G T + I L+Q++P + + + TRELA Q S+ +K+ ++V V G
Sbjct: 86 SGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFG 145
Query: 773 GTNLRDDIMRIYQNVQVII 829
G ++ D R+ + I+
Sbjct: 146 GMAIKKDEERLANDCPHIV 164
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +2
Query: 446 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAY 622
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTG T +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 623 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 802
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+ + +++
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLID 135
Query: 803 IYQ-NVQVIIAPLG 841
+ Q Q++I G
Sbjct: 136 LKQTRPQIVIGTPG 149
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +2
Query: 446 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAY 622
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTG T +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 623 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 802
+ +E +D + IQ +IV PTRE+++Q + ++A T R V GG+ + +++
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLID 135
Query: 803 IYQ-NVQVIIAPLG 841
+ Q Q++I G
Sbjct: 136 LKQTRPQIVIGTPG 149
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 73.3 bits (172), Expect = 2e-13
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIP---- 631
F F + L+ I + +E+P+PIQ +IP ALSG+DVL AK G+G T AY P
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 632 VLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 775
+++Q D K + A+IVVPTRELA+Q Q + K +I + GG
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGG 375
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 73.3 bits (172), Expect = 2e-13
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Frame = +2
Query: 272 RDKFGKMMTENRIS---SSNHVGNSISQTKGEVDKSIDDVGWKSK--LKIPPKDRRIKTS 436
++ F + M ENR + + + K E + DD W+ K ++ +D RI
Sbjct: 226 KNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMSDRDWRIFRE 285
Query: 437 DVT-DTRGNE-------FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 592
D +G +EE E+ + E G+ +P+PIQ +IPI L +DV+ A
Sbjct: 286 DFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVA 345
Query: 593 KNGTGXTGAYCIPVLEQVD--PKKDTIQ-------ALIVVPTRELALQTSQICIELAKHT 745
+ G+G T A+ +P+L + PK + + A+I+ PTRELA Q + + K
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 746 DIRVMVTTGGTNLRDDIMRIYQNVQVIIAPLG 841
I+ + GG + D M++ V+V+IA G
Sbjct: 406 GIKTVSVIGGASREDQGMKLRMGVEVVIATPG 437
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 72.5 bits (170), Expect = 4e-13
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +2
Query: 530 SPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 709
+P+Q A IP L G D+L A+ GTG T A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 710 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAPLG 841
++ L K ++ V GG +L + + V++A G
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPG 216
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 72.5 bits (170), Expect = 4e-13
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +2
Query: 530 SPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 709
+P+Q A IP L G D+L A+ GTG T A+ IP+L+++ I ALI+ PTRELA Q
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQ 172
Query: 710 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAPLG 841
++ L K ++ V GG +L + + V++A G
Sbjct: 173 IAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPG 216
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 70.9 bits (166), Expect = 1e-12
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Frame = +2
Query: 494 LMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIP----VLEQVDPKK 658
+M + +K + KP+ IQ +IP +SG+DV+ AK G+G T A+ +P +L+Q + ++
Sbjct: 315 MMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEE 374
Query: 659 -DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAP 835
D A+I+ PTRELA+QT + + AK ++V T GG + + I + + ++++
Sbjct: 375 GDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCT 434
Query: 836 LG 841
G
Sbjct: 435 PG 436
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 70.5 bits (165), Expect = 1e-12
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
FE+F L L G+ + + KP+ IQ +I +L+G DV+ AK G+G T A IPVLE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 644 VDPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 811
+ K + + ALI+ PTRELALQT + H + GG+++ + RI
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI-S 196
Query: 812 NVQVIIAPLG 841
+ +I+ G
Sbjct: 197 GINIIVCTPG 206
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F +F L +L I E GWEK + +QE+ I +AL K+++ RA+ G+G TGA+ IP++++
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 644 VDPKKDT------IQALIVVPTRELALQTSQICIELAK 739
+ + T A+I+ PT+EL Q ++ ++L++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQ 188
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Frame = +2
Query: 461 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLE 640
EF E L ++ ++ K ++KP+ IQ S PIA+SG+D+++ AK G+G T A+ +P L
Sbjct: 131 EFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALV 189
Query: 641 QVD-----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 805
+ + + L+++PTRELA Q ++ I+ +++ GG + +
Sbjct: 190 HITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDL 249
Query: 806 YQNVQVIIAPLG 841
+ V +++A G
Sbjct: 250 ERGVDIVVATPG 261
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 64.1 bits (149), Expect = 1e-10
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Frame = +2
Query: 491 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLE---QVDPKKD 661
LL + G+ + IQ SI L GKDVLA AK G+G T A+ +P +E +++ K+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 662 TIQALIVV-PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAPL 838
+I+V PTREL++QT + EL + +++ + GG+N + ++ + V +++A
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 839 G 841
G
Sbjct: 199 G 199
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+G T A+ +P+++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 644 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 775
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 776 TNLRDDIMRIYQNVQVIIAPLG 841
N RD + R+ ++IA G
Sbjct: 261 ENYRDQVNRLRAGTHILIATPG 282
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+G T A+ +P+++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 644 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 775
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 776 TNLRDDIMRIYQNVQVIIAPLG 841
N RD + R+ ++IA G
Sbjct: 245 ENYRDQVNRLRAGTHILIATPG 266
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+G T A+ +P+++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 644 V-DPKKDTIQ--------------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG- 775
+ D ++ AL++ PTRELA+Q + + + ++I+ + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 776 TNLRDDIMRIYQNVQVIIAPLG 841
N RD + R+ ++IA G
Sbjct: 242 ENYRDQVNRLRAGTHILIATPG 263
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/105 (29%), Positives = 58/105 (55%)
Frame = +2
Query: 479 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKK 658
LK ELL GI+ G+EKPS IQ++++ +GKDV +++ G+G T I +L+ +D +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 659 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 793
+Q +++ P R +A + + L ++ ++ T +D
Sbjct: 63 AHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAEND 107
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 59.3 bits (137), Expect = 4e-09
Identities = 33/135 (24%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+G T A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 644 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ +KD + +I+ PTRELA Q + + + + + GG N+ +
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 420 SQIMKGCTIIVGTIG 434
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 59.3 bits (137), Expect = 4e-09
Identities = 33/135 (24%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+G T A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 644 VDPKKDT---------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ +KD + +I+ PTRELA Q + + + + + GG N+ +
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 420 SQIMKGCTIIVGTIG 434
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 58.8 bits (136), Expect = 5e-09
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F + L + I G+++P+P+Q+ SIP G+D+++ A+ G+G T A+ +P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 644 V----------------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 775
+ KK AL++ PTREL+LQ + A T I + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 776 -TNLRDDIMRIYQNVQVIIAPLG 841
N +D I ++ ++IA G
Sbjct: 288 RENYKDQIHKLRLGCHILIATPG 310
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.0 bits (134), Expect = 8e-09
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Frame = +2
Query: 308 ISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGN---EFEEFC 478
++S V +S ++ EV++++ DV + + + R + D N F +
Sbjct: 73 LASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSS 132
Query: 479 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQV---- 646
+ LL + E +PSPIQ SIP ++VLA A G+G T A+ +PV++++
Sbjct: 133 MSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
Query: 647 ------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 751
+ A+++ PTRELA QT ++ +T I
Sbjct: 193 QRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSI 233
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.0 bits (134), Expect = 8e-09
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Frame = +2
Query: 458 NEFEEFCLKRELLMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPV 634
N FE+ +MG K G+EKPSPIQ P+ LSG+D + ++ G+G T A+ +P
Sbjct: 83 NSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPA 142
Query: 635 LEQVD------PKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 781
L +D K D Q L++ PTRELA Q ++ + + + GG +
Sbjct: 143 LLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGE-VKKYSYNGYKSVCLYGGGS 201
Query: 782 LRDDIMRIYQNVQVIIAPLG 841
+ + V+++IA G
Sbjct: 202 RPEQVEACRGGVEIVIATPG 221
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 458 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGXTGAYCIP 631
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTG T A+ +
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 632 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 784
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 458 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGXTGAYCIP 631
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTG T A+ +
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 632 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 784
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +2
Query: 458 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGXTGAYCIP 631
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTG T A+ +
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 632 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNL 784
+L ++D Q + + PT ELA Q ++ ++ K D +++ G N+
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 56.4 bits (130), Expect = 3e-08
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Frame = +2
Query: 272 RDKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDT 451
+++ K + SS+ N+ T + + G ++ PK + + S TD
Sbjct: 94 KERLAKRKQKEAESSAKKSENATETTTEKPKEQKKRKGGENGDTGKPKKSKKEASKKTDI 153
Query: 452 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGXTGAYCI 628
+ + + L E+L I + G+ +P+ IQ A +P A+ + DVL A+ G+G T A+ I
Sbjct: 154 SAWK-QFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 629 PV----LEQVDPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG 775
P+ LE D ++T +ALIV PTREL +Q + L T + GG
Sbjct: 213 PLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
Query: 776 -TNLRDDIMRIYQNVQVIIAPLG 841
++ + + Q +++A G
Sbjct: 273 LAQVKQERIISQQRPDIVVATPG 295
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 55.2 bits (127), Expect = 6e-08
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Frame = +2
Query: 524 KPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIP----VLEQVDPKKDTI------QA 673
+P+PIQ AS + G DV+A A G+G T A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 674 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI--MRIYQNVQVIIAPLG 841
LIV PTREL QT +L T ++ + GG + ++ +R + + +++A +G
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMG 875
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 55.2 bits (127), Expect = 6e-08
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Frame = +2
Query: 524 KPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIP----VLEQVDPKKDTI------QA 673
+P+PIQ AS + G DV+A A G+G T A+ IP ++E+ + +D +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 674 LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI--MRIYQNVQVIIAPLG 841
LIV PTREL QT +L T ++ + GG + ++ +R + + +++A +G
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMG 875
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 644 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 463 GQIEKGATIIVGTVG 477
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 644 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 463 GQIEKGATIIVGTVG 477
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 644 V--DPKKDTI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ D +T + +I+ PTRELA Q + A T + + GG + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 463 GQIEKGATIIVGTVG 477
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Frame = +2
Query: 536 IQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQV----------DPKKDTIQALIVV 685
IQ A IP L G DVL +A+ G T A+ +P+++++ + D ALI+
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILA 466
Query: 686 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAPLG 841
PTRELA Q + ++TDI V+++ G ++ + I ++I G
Sbjct: 467 PTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCG 518
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 674 GQIEKGATIIVGTVG 688
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 674 GQIEKGATIIVGTVG 688
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+G T A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 644 VDPKKDTIQA---------LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 796
+ + D A +I+ PTREL Q + A T + + GG + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 797 MRIYQNVQVIIAPLG 841
+I + +I+ +G
Sbjct: 674 GQIEKGATIIVGTVG 688
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 14/125 (11%)
Frame = +2
Query: 509 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPV----LEQVDP----KKDT 664
+KG P+ IQ IP+ALSG+D++ A G+G T + +P+ LEQ + +
Sbjct: 207 QKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEG 266
Query: 665 IQALIVVPTRELALQTSQICIEL------AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI 826
LI+VP+RELA Q + IE+ A ++R + GG + + + + ++
Sbjct: 267 PFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIV 326
Query: 827 IAPLG 841
+A G
Sbjct: 327 VATPG 331
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 52.0 bits (119), Expect = 6e-07
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = +2
Query: 494 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKK---DT 664
L+ +F+K ++ + +Q S L+ DV+ + G+G T A+ +P++ + K
Sbjct: 21 LLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD 80
Query: 665 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI-MRIYQNVQVIIAPLG 841
I ALI+ P+REL Q + A+ ++ V TGG + +I M +NV +++A G
Sbjct: 81 IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPG 140
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 464 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQ 643
FEEF + EL + W P+ +Q +IP L G D L A+ G+G TGA+ +P+ +
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 644 V 646
V
Sbjct: 64 V 64
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Frame = +2
Query: 497 MGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGXTGAYCIPV----LEQVDPKKD 661
M IF + +P+ IQ A +P A+ + DVL A+ G+G T A+ IP+ LE D ++
Sbjct: 1 MLIFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQE 60
Query: 662 TI-------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG-TNLRDDIMRIYQNV 817
T +ALIV PTREL +Q + L T + GG ++ + + Q
Sbjct: 61 TESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 120
Query: 818 QVIIAPLG 841
+++A G
Sbjct: 121 DIVVATPG 128
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 527 PSPIQEASIPIALSGKDVLARAKNGTGXTGAYCIPVLEQVDPKKDTI-QALIVVPTRELA 703
PS E P L +DV A G+G T Y +PVL V K I QA+I+VP + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 704 LQTSQICIELAKHTDIRVMVTTGGTN 781
Q + + +V+ G N
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGAN 227
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 730 TGKTHRHSCNGYYRRHKPSR*YNAYLSKCTSDYCPPGRMID 852
T + CN YRR+ S + ++ KC S P ++D
Sbjct: 331 TDEIQEFKCNVCYRRYNSSFWFERHMEKCNSSTALPPALLD 371
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 778 CASCSNHYTNVCVFCQFN 725
CA C NH ++C+ CQ N
Sbjct: 44 CAICRNHIMDLCIECQAN 61
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 778 CASCSNHYTNVCVFCQFN 725
CA C NH ++C+ CQ N
Sbjct: 35 CAICRNHIMDLCIECQAN 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,754,838
Number of Sequences: 27780
Number of extensions: 341224
Number of successful extensions: 893
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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