Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B14
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical p... 37 0.017
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF016444-7|AAB65924.1| 204|Caenorhabditis elegans Hypothetical ... 31 1.5
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 29 3.4
U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 29 4.5
U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical pr... 29 5.9
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 29 5.9
AC006633-5|AAO21429.1| 506|Caenorhabditis elegans Prion-like-(q... 29 5.9
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 29 5.9
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical
protein C25A1.3 protein.
Length = 380
Score = 37.1 bits (82), Expect = 0.017
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +2
Query: 284 VLDAACGTGIDSMMLVNEGFK-VVSVDASDKMLKHA---LKARWDKRKNPKYD-DWVIEE 448
VLD ACG G D G K VV D +D ++ A K + +KN + +++ +
Sbjct: 58 VLDLACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNIFTVQFIVAD 117
Query: 449 ANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 622
E L IE P FD V C FA L + D+ ++ L N LKPGG+
Sbjct: 118 CTKENLEDRIENKDP---FDLVSC---QFA-LHYSFVDEASARIFLKNAVGMLKPGGV 168
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 284 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 388
+LD CGTG+ S ++++ G V VD S ML+ A
Sbjct: 57 LLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91
>AF016444-7|AAB65924.1| 204|Caenorhabditis elegans Hypothetical
protein C36C5.5 protein.
Length = 204
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +2
Query: 86 QRILNYGSGPGIPLAFLGYSLRGCKDQYADGKAAKTWNKF------IGDSNQRTQNYKDF 247
++I NY SG ++++ C+D+ A+ K K W+ F D ++ Q +D
Sbjct: 101 KKIKNYCSG----VSYIANDFEECRDKLAENKCYKDWDPFQRKFNLEKDEKKKEQMREDS 156
Query: 248 LIGLLKNNGC-KTVLDAACG 304
+ C KTV+ CG
Sbjct: 157 CKNYFGEDNCMKTVVTETCG 176
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 257 LLKNN-GCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASDKMLKH 385
LLK N K VLD CG G++S + G KVV D S +M+++
Sbjct: 31 LLKYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIEN 75
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 29.5 bits (63), Expect = 3.4
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Frame = +2
Query: 284 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDKRKNPKYDDWVIEEANW 457
VLD CG G S +L K V +D ++K +K A R K D E +
Sbjct: 169 VLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAA-------RLKKKSDGTDFENLEF 221
Query: 458 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFI 631
I FD VI G+ H DQ LCL + +KP GL+ +
Sbjct: 222 VVADAAIMPSSWTDSFDLVILFGS--CH------DQMRPDLCLLEVHRVVKPDGLVAV 271
>U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical
protein R08E5.3 protein.
Length = 365
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 284 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDKRKNPKYDDWVIEEANW 457
VLD CG G S +L + K V +D + ++ A + + + +++ E +
Sbjct: 179 VLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQAKQRK--TKSGAAFNNLEFIECDA 236
Query: 458 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 622
+P+ + FD V+ + D DQR LC+ + LKP G+
Sbjct: 237 GKMPE-----IWTDSFDLVL--------IFDACHDQRRPDLCVQEIHRVLKPSGM 278
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Frame = +2
Query: 287 LDAACGTGIDSMMLVNEGFKVVSVDASDKM-----LKHALKA--RWDKRKNPKYDDWVIE 445
+D ACGTG+ + +L N G K +SV + + ++ + A WD++ ++
Sbjct: 355 VDKACGTGLTTALLSNLGKKQISVWIKENLSNQDEVRKIVSAFSNWDEKSRITVLSALLS 414
Query: 446 EANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLS 589
+ ET Q + T + D+ F G + + E ++ +++L ++
Sbjct: 415 QKATET-SQSVVTSIIDSLFYVKTRAGEFASIQISEKNEEVLRQLVVA 461
>U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical
protein F19C7.8b protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 703 FAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 539
+ +I P +GSS+ V VVD +P WL FR +T+ + + + QM
Sbjct: 180 YIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 234
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 703 FAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 539
+ +I P +GSS+ V VVD +P WL FR +T+ + + + QM
Sbjct: 317 YIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 371
>AC006633-5|AAO21429.1| 506|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform b protein.
Length = 506
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 665 GATPGHSIYYNCKYPVDIKTSVLVVRGRAELVAL--DYCIDTSNDGSKQEKSEFRLCYYP 838
GA S+Y + K S LV +G ++A+ DY ID +DG++ + + P
Sbjct: 63 GALCNGSLYAQAAAKI-FKESALVTKGHGAVLAVLTDYGIDVLHDGNELVEEAQLVASAP 121
Query: 839 HKLSTFTSMLD 871
+S +++D
Sbjct: 122 FNMSAHLAIID 132
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 665 GATPGHSIYYNCKYPVDIKTSVLVVRGRAELVAL--DYCIDTSNDGSKQEKSEFRLCYYP 838
GA S+Y + K S LV +G ++A+ DY ID +DG++ + + P
Sbjct: 63 GALCNGSLYAQAAAKI-FKESALVTKGHGAVLAVLTDYGIDVLHDGNELVEEAQLVASAP 121
Query: 839 HKLSTFTSMLD 871
+S +++D
Sbjct: 122 FNMSAHLAIID 132
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 612 GFRHFAKLLRHSFCILWSPYSSNKWAN---EFPRHMTASN*VSGRN 484
GFRH + L FC+ Y ++ N P H+T + ++GRN
Sbjct: 200 GFRHHSAKLSCFFCLAPETYYKHEGPNRKLSRPGHLTIQDSINGRN 245
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -2
Query: 411 LLSQRALRACFNILSEASTDTTLNPSFTSIMES--IPVPQAASKTVLQPLFFKRPIKKSL 238
L+++ + + F S++S + S TS + S +P P + KT+ +P+ PI K++
Sbjct: 880 LVTESSSESTFTDKSDSSVTVAASASRTSTLTSSTLPPPPSLPKTIEKPISTPPPISKNV 939
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,014,788
Number of Sequences: 27780
Number of extensions: 443781
Number of successful extensions: 1441
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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