Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_B13
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0434 - 22904790-22904927,22905220-22905318,22905404-229054...   123   2e-28
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879     32   0.52 
06_03_0962 + 26351861-26351899,26353304-26353530,26355183-263554...    29   6.4  
02_01_0589 - 4355207-4355410,4355574-4355747,4356234-4356344,435...    28   8.5  

>02_04_0434 -
           22904790-22904927,22905220-22905318,22905404-22905472,
           22905582-22905683,22905750-22905824,22906293-22906417,
           22906511-22906589,22906933-22907074,22907200-22907441
          Length = 356

 Score =  123 bits (296), Expect = 2e-28
 Identities = 53/112 (47%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
 Frame = +3

Query: 297 NRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNL-YVVNEISEMKNCNKCI 473
           N+++VLV   R IN+R+RHLM+++  L+PH K +SK+E  ++    +NE+ E++NC+ C+
Sbjct: 66  NKEKVLVTCSRRINYRYRHLMQNVVSLLPHAKKDSKVESKQSKGNALNELLELRNCSSCL 125

Query: 474 LFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSXAFVIF 629
            FE RK +DLY+W+   P GPS KFLV  ++TM ELK+TGN L+GS   + F
Sbjct: 126 FFECRKQKDLYLWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLITF 177



 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
 Frame = +2

Query: 689 IXGVPNYHPXSQPFFDHVYTFMVLDHRIWFXNYXI---------LSEXG----ALXEIXX 829
           I   P  H  ++PF DHV+ F ++D  +WF NY I         + + G     L E+  
Sbjct: 222 IFATPKDHRKAKPFHDHVFVFSIVDDHVWFRNYQISVPHNEIDKVDKGGLDKMTLVEVGP 281

Query: 830 RFVLNPXXIXXGSF 871
           RF LNP  I  GSF
Sbjct: 282 RFCLNPIKIFGGSF 295


>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
          Length = 696

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 321 AMRGINHRH-RHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFE---GR 488
           A R   H   R ++ED+K  + H K   +     NL +VNE+ E K   K +L E    R
Sbjct: 262 AWRSREHEKVRAILEDMKADLDHEKKNRRRLEMINLKLVNELKEAKMSAKQLLQEYDNER 321

Query: 489 KMRDLYMWISN 521
           K R+L   + N
Sbjct: 322 KARELTEEVCN 332


>06_03_0962 +
           26351861-26351899,26353304-26353530,26355183-26355421,
           26356276-26356495,26358093-26358214,26358428-26358729,
           26358776-26358883,26359314-26359376,26359415-26359621,
           26359702-26359812,26359899-26360228
          Length = 655

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 623 YLSIHNLQKDPHYCLLKELLVQIXGVPN 706
           YLS+H+ +KD ++CL   L   + G  N
Sbjct: 243 YLSLHHREKDSNFCLFMPLFDALGGTLN 270


>02_01_0589 -
           4355207-4355410,4355574-4355747,4356234-4356344,
           4356506-4356712,4357609-4357716,4358442-4358698,
           4359120-4359241,4359782-4360001,4360877-4361130,
           4361782-4362015,4362143-4362189
          Length = 645

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 623 YLSIHNLQKDPHYCLLKELLVQIXGVPNY 709
           YLS+H+ +KD ++CL   +   + G  N+
Sbjct: 253 YLSLHHREKDSNFCLFMPIFDLLGGTLNH 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,839,830
Number of Sequences: 37544
Number of extensions: 379965
Number of successful extensions: 792
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)