Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_B13
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   4.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.2  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 562 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFIS-LISLTTYKFLLLSIL 401
           +F T NL +   GI  + +   + +LPS+    +   IS L+SLT +  LL  I+
Sbjct: 240 LFYTVNLIIPCVGISFLSVL--VFYLPSDSGEKISLCISILLSLTVFFLLLAEII 292


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 562 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFISLISLTTYKFLLLS 407
           +F T NL +   GI  + I   + +LPS+    +   IS++   T  FLLL+
Sbjct: 240 LFYTVNLIIPCMGISFLTIL--VFYLPSDSGEKVSLSISILLSLTVFFLLLA 289


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 551 QKFSTWSIWYIRYPHIQIPHLSSFK*NAFVAVFHL 447
           + + TW  W++ +   +I     +K N     FHL
Sbjct: 275 RNYGTWISWWVEFAKPKIKSFFRWKTNERFRSFHL 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,200
Number of Sequences: 2352
Number of extensions: 15319
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)