Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B12
(1405 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 37 0.033
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 35 0.13
08_01_0059 - 394001-394708 33 0.54
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.71
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 32 0.94
12_02_1174 - 26696869-26698191 31 1.6
11_01_0066 - 536281-537196,537397-537452 30 3.8
09_04_0180 + 15367737-15367755,15368874-15369739 30 3.8
09_02_0543 + 10427321-10428315,10428440-10429154 30 5.0
04_03_0904 + 20717005-20718087 29 6.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 8.8
02_05_0149 + 26290236-26290880 29 8.8
02_02_0240 + 8196140-8198248,8198381-8198650 29 8.8
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 37.1 bits (82), Expect = 0.033
Identities = 25/92 (27%), Positives = 32/92 (34%)
Frame = +3
Query: 648 GHSXXXXXSNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSAS 827
GH+ S PP P P + T P P PP ++P S+S
Sbjct: 635 GHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPP-TEKSPPTPESESSS 693
Query: 828 XPLHXPTTXXQSPPRHAATTDIXSPXTPRPPA 923
P P SPP+ + SP TP A
Sbjct: 694 PPPPAPEGHMPSPPKSTPPVE-KSPPTPESEA 724
Score = 32.3 bits (70), Expect = 0.94
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Frame = +3
Query: 642 TP-GHSXXXXXSNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRX 818
TP GH+ S PP P P + P P PP ++P
Sbjct: 665 TPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPP-VEKSPPTPESE 723
Query: 819 SASXPLHXPTTXXQSPPRHAATTDIXSPXTP 911
++S P P SPP+ + + P P
Sbjct: 724 ASSPPPPAPEGHTPSPPKSSPPEEKSPPIPP 754
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/80 (26%), Positives = 28/80 (35%)
Frame = +3
Query: 672 SNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTT 851
S PP P P + P P PP ++P ++S P P
Sbjct: 610 STPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPP-SEKSPPTPESKASSPPPPTPEG 668
Query: 852 XXQSPPRHAATTDIXSPXTP 911
SPP+ T+ SP TP
Sbjct: 669 HTPSPPKSTPPTE-KSPPTP 687
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 35.1 bits (77), Expect = 0.13
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = +3
Query: 699 PXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTTXXQSPPRHA 878
P PA P P P PPP +P +A PL PTT +PP
Sbjct: 59 PPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPL-PPTTTTTTPPTAP 117
Query: 879 ATTDIXSPXTPRP 917
P P P
Sbjct: 118 VPAAAPPPTAPSP 130
>08_01_0059 - 394001-394708
Length = 235
Score = 33.1 bits (72), Expect = 0.54
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 677 PPPAXRPTXXXXMXXXXPXXHAAXRXPXPPGRTXATXXPEPXXPPPLXRLLXPXXPH 847
PPP R P A P PP R P P PPP L P PH
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPP-PPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPH 58
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.71
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +2
Query: 677 PPPAXRPTXXXXMXXXXPXXHAAXRXPXPPGRTXATXXPEPXXPPPLXRLLXPXXP 844
PPP P+ P P P ++ P P PPPL L P P
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Score = 29.9 bits (64), Expect = 5.0
Identities = 24/92 (26%), Positives = 26/92 (28%)
Frame = +3
Query: 645 PGHSXXXXXSNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSA 824
P HS PPP P P + P P PP R P S
Sbjct: 628 PNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSK 687
Query: 825 SXPLHXPTTXXQSPPRHAATTDIXSPXTPRPP 920
P P PP + T P P PP
Sbjct: 688 GPP---PPPPPPLPPAN-RTNGPGVPSAPPPP 715
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 32.3 bits (70), Expect = 0.94
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 744 RDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTTXXQSPPRHAATTDIXSP-XTPRPP 920
R P P P P R P +A P PT +PPR AA + +P +P PP
Sbjct: 137 RTPMPTPTPTPTPTPTRPPVPVW--AAPLPARTPTPTPSAPPRAAAPSPAGTPSPSPIPP 194
Query: 921 A 923
+
Sbjct: 195 S 195
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Frame = +3
Query: 678 PPPXXXXPXPAXXX-TPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTTX 854
PPP P P TP DT P P PPP R P R P P +
Sbjct: 217 PPPSPPPPPPTVPPRTP--GDTPAVVEPKPQ--PPPPPPRAPVKMPRVLEPKPSPPPPSP 272
Query: 855 XQSPPRHAATTDIXSPXTPRPP 920
PP + +P P P
Sbjct: 273 LPPPPEDYWSPTAVTPPEPTKP 294
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/83 (22%), Positives = 28/83 (33%)
Frame = +3
Query: 672 SNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTT 851
S PPP P P +P P P PP + P R P P
Sbjct: 266 SPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQP--SQRYWTPPPAITPEP 323
Query: 852 XXQSPPRHAATTDIXSPXTPRPP 920
+ + +++ + +PRPP
Sbjct: 324 AKPAAGKPTSSSPPSTKDSPRPP 346
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 677 PPPAXRPTXXXXMXXXXPXXHAAXRXPXPPGRTXATXXPEPXXPP 811
PPP+ PT P A R P P R AT P P PP
Sbjct: 239 PPPSPTPTTTRASPTPPPIPTATVRPPPPLPR--ATVTPTPTTPP 281
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +3
Query: 678 PPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTTXX 857
PPP P P P D P P P P P PT
Sbjct: 131 PPPPRPMPIPTPSPRPRPPDPEPKPDPEPDPELEPEPEPEPDPEPEPEPPTPKPIPTPIP 190
Query: 858 QSPPR 872
PPR
Sbjct: 191 SPPPR 195
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +3
Query: 672 SNPPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTT 851
+ PPP P P P PPP P +A+ H P+
Sbjct: 24 ATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSPHSPS- 82
Query: 852 XXQSPPRHAATTDIXSPXTPRP 917
+ P A DI P P P
Sbjct: 83 -PSNAPWVAPAADIPPPPPPPP 103
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 6.6
Identities = 22/81 (27%), Positives = 26/81 (32%)
Frame = +3
Query: 678 PPPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRNPXXXXRXSASXPLHXPTTXX 857
P P P P P T P P PPP P + P PT
Sbjct: 267 PTPTPYTP-PTYKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTPYKPQPKPTPSP 325
Query: 858 QSPPRHAATTDIXSPXTPRPP 920
+ P+ T +P TP PP
Sbjct: 326 YT-PKPTPTPPTYTP-TPTPP 344
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 762 PXGXPPPXXXRNPXXXXRXSASXPLHXPTTXXQSPPRHAATTDIXSPXTPRPPA 923
P PPP R P R P PT PP A+ + +P P PPA
Sbjct: 70 PTPPPPPPAPRPPRRHHRIPPPPPPLLPTP----PPPPASISPTPAPPLPPPPA 119
>02_05_0149 + 26290236-26290880
Length = 214
Score = 29.1 bits (62), Expect = 8.8
Identities = 26/82 (31%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Frame = -1
Query: 919 GGRGVXGXWMSVVAAWRGGLWXXVVGXXRGXEAXKRXXXXGFRXXXGGGXPXGXGXXSRX 740
GG G G S AWR G W G + G R GGG G G R
Sbjct: 60 GGSG-SGQGSSPDGAWRYG-WGWAASPG-GKGSGFGFGYGGSRGEGGGGGGGGGGGSGRA 116
Query: 739 VSXXXGV-XHXAGXGXXXXGGG 677
G H G G GGG
Sbjct: 117 YGFGGGYGGHPGGFGGGGGGGG 138
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Frame = +3
Query: 681 PPXXXXPXPAXXXTPHXXDTXRDXXPXPXGXPPPXXXRN---PXXXXRXSASXPLHXPTT 851
P P P P P P PPP +N P S P H PT
Sbjct: 589 PTMHPPPPPPIPGQPQVIRMPGSMGPMPTNIPPPPPGQNPYMPGPPRPYSMPPPPHMPTM 648
Query: 852 XXQSPPRHAATTDIXSPXTPRPPA 923
P P P+PPA
Sbjct: 649 ATMVNP--IGIPQPPPPLPPQPPA 670
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,020,465
Number of Sequences: 37544
Number of extensions: 292792
Number of successful extensions: 1615
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4432005256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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