Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_B05
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   5.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   5.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   5.1  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.7  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   8.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   8.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   8.9  

>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 428 KSRHMID*KKYQNLNLSYNNNC 363
           K+ H  +  KY   N +YNNNC
Sbjct: 88  KTIHNNNNYKYNYNNNNYNNNC 109


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 428 KSRHMID*KKYQNLNLSYNNNC 363
           K+ H  +  KY   N +YNNNC
Sbjct: 88  KTIHNNNNYKYNYNNNNYNNNC 109


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 428 KSRHMID*KKYQNLNLSYNNNC 363
           K+ H  +  KY   N +YNNNC
Sbjct: 88  KTIHNNNNYKYNYNNNNYNNNC 109


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 401 KYQNLNLSYNNNC 363
           KY   N +YNNNC
Sbjct: 97  KYNYNNNNYNNNC 109


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 176 CY--DYVIDGSKSDTKGRXLHYFI 111
           CY  ++ + G    T+GR LHY +
Sbjct: 123 CYKLEHPVTGCGERTEGRCLHYTV 146


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 176 CY--DYVIDGSKSDTKGRXLHYFI 111
           CY  ++ + G    T+GR LHY +
Sbjct: 128 CYKLEHPVTGCGERTEGRCLHYTV 151


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 50  DFKLLTHPSCIPFIQFNLKI**NSVXPGLLYLIW 151
           D K+L + + I  +  N     +SV P +LYL W
Sbjct: 780 DEKILENQNIITHMILNYVGSEDSVIPRILYLTW 813


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 176 CY--DYVIDGSKSDTKGRXLHYFI 111
           CY  ++ + G    T+GR LHY +
Sbjct: 128 CYKLEHPVTGCGERTEGRCLHYTV 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,435
Number of Sequences: 438
Number of extensions: 2494
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)