Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B04
(914 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 135 2e-30
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 122 1e-26
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 119 9e-26
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 112 1e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 94 5e-18
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 94 5e-18
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 93 7e-18
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 93 7e-18
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 92 2e-17
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 87 8e-16
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 84 5e-15
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 81 5e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 79 2e-13
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 79 2e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 76 1e-12
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 73 1e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 67 5e-10
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 66 9e-10
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 65 2e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 65 3e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 60 1e-07
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 58 3e-07
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 57 5e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 56 1e-06
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 56 1e-06
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 56 2e-06
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 56 2e-06
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 55 3e-06
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 55 3e-06
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 53 1e-05
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 53 1e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 52 2e-05
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 50 8e-05
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 49 2e-04
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 49 2e-04
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 43 0.010
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 43 0.010
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 43 0.010
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 43 0.013
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 41 0.038
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 40 0.067
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 40 0.12
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 39 0.20
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 38 0.27
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 38 0.36
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 38 0.36
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 38 0.47
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 38 0.47
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 37 0.62
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 37 0.83
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 37 0.83
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 36 1.1
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.4
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 36 1.4
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 36 1.9
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 35 3.3
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 34 4.4
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 34 5.8
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 33 7.7
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 33 7.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 135 bits (326), Expect = 2e-30
Identities = 67/94 (71%), Positives = 70/94 (74%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA S+ V G GN IGKP TVPC VTG+CGSV VRLIP P GT
Sbjct: 143 CSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGT 202
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VPKKLL MAG+ D YTSA G LG F
Sbjct: 203 GIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 236
Score = 107 bits (257), Expect = 4e-22
Identities = 63/106 (59%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +3
Query: 201 GXXRGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI--NXIRDH*FL 374
G RG GRG K + KEW+PVTKL RLV K + + +F LPI + I D FL
Sbjct: 41 GRGRGRGRGARGGKAEDKEWMPVTKLGRLVKDMKIKSLEEIY-LFSLPIKESEIIDF-FL 98
Query: 375 SSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
+ SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GH+GLGVK
Sbjct: 99 GA--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVK 142
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 122 bits (294), Expect = 1e-26
Identities = 62/94 (65%), Positives = 66/94 (70%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIR AIILA S+ + G GN IGKP TVPC VTG CGSV V LIP P GT
Sbjct: 87 CSKEVATAIREAIILAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGT 146
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
G+VSA VPKKLL MAG+ D YTSA LG F
Sbjct: 147 GMVSAPVPKKLLMMAGIDDCYTSARDCTASLGNF 180
Score = 66.5 bits (155), Expect = 9e-10
Identities = 32/39 (82%), Positives = 32/39 (82%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
D VL IMPVQKQT AGQRTRF AFVAIGD GH GLGVK
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVK 86
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 119 bits (287), Expect = 9e-26
Identities = 59/86 (68%), Positives = 63/86 (73%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKE ATAIRGA+ILA S+ V G GN I KP TVP VTG+CGSV VRLIP P GT
Sbjct: 83 CSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGT 142
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXG 771
G VSA VPKKLL MAG+ D YTSA G
Sbjct: 143 GFVSAPVPKKLLMMAGIDDCYTSARG 168
Score = 34.7 bits (76), Expect = 3.3
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 447 RTRFKAFVAIGDXXGHIGLGVK 512
+ RFKAFVAIGD G +G GVK
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVK 82
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 213 GPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNR 308
GPG G G ED KEW+PVT L RLV K R
Sbjct: 34 GPGGGRG-APED-KEWIPVTGLGRLVKDMKIR 63
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 112 bits (269), Expect = 1e-23
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
C+KEVATAIRGAII+ S+ + G G +G P TVP V+GKCGSVTVRL+P P G
Sbjct: 116 CAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGA 175
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
G+V+A V K+ L +AG++D YT + GS LG F
Sbjct: 176 GLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
Score = 102 bits (245), Expect = 1e-20
Identities = 59/104 (56%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Frame = +3
Query: 210 RGPGRGXGXCKEDX-KEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*FLSS 380
RG GRG K D KEWVPVTKL RLV + K + + ++ LPI I D+ FL
Sbjct: 17 RGRGRGRRGAKRDEEKEWVPVTKLGRLVKAGKIKSIEEIY-LYSLPIKEYQIVDY-FL-- 72
Query: 381 XPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
P LND V+ ++PVQKQTRAGQRTRFKAFV IGD GH+GLG+K
Sbjct: 73 -PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIK 115
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 93.9 bits (223), Expect = 5e-18
Identities = 56/136 (41%), Positives = 71/136 (52%)
Frame = +3
Query: 387 SLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVKLQQGSRHCHSRRYNPC*X 566
SL D VL IMPV+K+TRAGQRTRFKAFVAI D G+ G LQ G R H R ++P
Sbjct: 29 SLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAGRVEVLQGGGRR-HPRGHHPDQA 87
Query: 567 VCLXSSNRXLX*QXRKATHRPLQXHRQVWFCNSPADS*XSWYWNCVCXSS*EAXSXGWCT 746
+ + R L Q R+A HRPLQ R + C +W+ + + EA W
Sbjct: 88 LHCHRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYL 147
Query: 747 GLXHLSSWXXXXPWEI 794
L HLS P ++
Sbjct: 148 RLLHLSQGLHCHPGQL 163
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 93.9 bits (223), Expect = 5e-18
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
+KEVA AIR II+A SV + G G +G+P ++ TGKCGSVTVRLIP P G+G
Sbjct: 118 AKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSG 177
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXG 771
IV++ KKLL +AGV+D YT + G
Sbjct: 178 IVASPAVKKLLQLAGVEDVYTQSNG 202
Score = 87.4 bits (207), Expect = 4e-16
Identities = 50/104 (48%), Positives = 59/104 (56%)
Frame = +3
Query: 201 GXXRGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*FLSS 380
G RG G + K WVPVTKL RLV + K F + LP+ + L
Sbjct: 16 GRNRGRPNRRGPRNTEEKGWVPVTKLGRLVKAGKITTIEEIF-LHSLPVKEFQIIDTL-- 72
Query: 381 XPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
P L D V+ I PVQKQTRAGQRTRFKA V +GD GH+GLG+K
Sbjct: 73 LPGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIK 116
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 93.5 bits (222), Expect = 7e-18
Identities = 58/100 (58%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 210 RGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI--NXIRDH*FLSSX 383
RG RG K + KEW+PVTKL RLV K + + +F LPI + I D FL +
Sbjct: 22 RGGFRGG---KAEDKEWIPVTKLGRLVKDMKIKSLEEIY-LFSLPIKESEIIDF-FLGA- 75
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGL 503
SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GH+GL
Sbjct: 76 -SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 93.5 bits (222), Expect = 7e-18
Identities = 55/103 (53%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 RGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI--NXIRDH*FLSSX 383
RG GRG G +D WVP TKL RLV K + F +F LPI + I +H F+
Sbjct: 34 RGRGRGRGRGGDDKDVWVPCTKLGRLVQQGKIKSLEHIF-LFSLPIKEHQIVEH-FIGG- 90
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L D V+ I PVQKQT AGQR RFKAFV +GD GHIGLGVK
Sbjct: 91 -ELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVK 132
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/90 (50%), Positives = 60/90 (66%)
Frame = +1
Query: 520 KEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTGI 699
KEVA +I+G++ILA ++ V G G+ +G+P T+P V GKCGSV VRLIP P G GI
Sbjct: 135 KEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGI 194
Query: 700 VSAXVPKKLLXMAGVQDXYTSAXGSXWXLG 789
V++ KK+L MAG+ D YT + G LG
Sbjct: 195 VASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 91.9 bits (218), Expect = 2e-17
Identities = 72/187 (38%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Frame = +3
Query: 210 RGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*FLSSX 383
RGP R G +EWVP+TKL RLV K + F F +PI I DH FL +
Sbjct: 53 RGPRRFGGE-----QEWVPLTKLGRLVKGGKIKSLETIFQ-FSIPIKEYQIVDH-FLKT- 104
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVKLQQGSRHCHSR--RYNP 557
L + L I PVQKQT AGQ+TRFKA+V +GD HIGLG K + + N
Sbjct: 105 --LKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQELCNLNQ 162
Query: 558 C*XVCLXSSNRXLX*QXRKATHRPLQXHRQVWFCNSPADS*XSWYWNCVCXSS*EAXSXG 737
C S R L Q R TH P+Q R+ S S YW E + G
Sbjct: 163 CQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNG 222
Query: 738 WCTGLXH 758
W L H
Sbjct: 223 WYPRLLH 229
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 86.6 bits (205), Expect = 8e-16
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
SKE A+AIRGAI A ++ V G GKP TV C +GKCG+ V++IP P GTG
Sbjct: 105 SKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTG 164
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
I+S V KK+ +AG++D YT + G+
Sbjct: 165 IISGSVNKKIFELAGIKDLYTLSFGA 190
Score = 65.3 bits (152), Expect = 2e-09
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = +3
Query: 210 RGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*F--LSSX 383
R PG+ +++ EW+P T + RLV K + F ++ IR+ L
Sbjct: 7 RNPGKPFP--RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHV----IREPEIVDLLCG 60
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
S+ + VL I VQKQTRAGQ+TR KA V +GD GH+G+G K
Sbjct: 61 NSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTK 103
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 83.8 bits (198), Expect = 5e-15
Identities = 40/57 (70%), Positives = 42/57 (73%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXP 684
CSKEVATAIRGAIILA S+ V G GN IGKP TVPC VTG+C SV V LIP P
Sbjct: 83 CSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 75.8 bits (178), Expect = 1e-12
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 261 VPVTKLXRLVXSRKNRXTXRAFTVFYLPI--NXIRDH*FLSSXPSLNDXVLXIMPVQKQT 434
+PVTKL L+ K + + +F LPI + I D FL + SL D VL IMPVQKQT
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIY-LFSLPIKESEIIDF-FLGA--SLKDEVLKIMPVQKQT 56
Query: 435 RAGQRTRFKAFVAIGDXXGHIGLGVK 512
AGQ TRFKAFV IGD GH+GL VK
Sbjct: 57 CAGQHTRFKAFVPIGDYNGHVGLSVK 82
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 80.6 bits (190), Expect = 5e-14
Identities = 46/85 (54%), Positives = 51/85 (60%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
S EVATAIRGAIIL S++ G GN I KP TV C VT SV V I P GT
Sbjct: 44 SLEVATAIRGAIILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTD 103
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXG 771
I+SA VPKKLL MA + D + A G
Sbjct: 104 ILSAPVPKKLLRMASIDDGDSLARG 128
Score = 40.3 bits (90), Expect = 0.067
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 405 LXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ I +K+T AGQ+TRFKAFV D GH+ L V
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 79.0 bits (186), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +1
Query: 637 VTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
VTG+CGSV VRLIP P GTGIVSA VPKKLL MAG+ D YTSA G LG F
Sbjct: 126 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 178
Score = 78.6 bits (185), Expect = 2e-13
Identities = 49/89 (55%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +3
Query: 201 GXXRGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI--NXIRDH*FL 374
G RG GRG K + KEW+PVTKL RLV K + + +F LPI + I D FL
Sbjct: 41 GRGRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIY-LFSLPIKESEIIDF-FL 98
Query: 375 SSXPSLNDXVLXIMPVQKQTRAGQRTRFK 461
+ SL D VL IMPVQKQTRAGQRTRFK
Sbjct: 99 GA--SLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 78.6 bits (185), Expect = 2e-13
Identities = 45/83 (54%), Positives = 52/83 (62%)
Frame = +1
Query: 547 AIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKL 726
AIILA S+ V T G + +P VPC VTG+CGS+ V LIP P GTG VSA VP KL
Sbjct: 131 AIILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KL 188
Query: 727 LXMAGVQDXYTSAXGSXWXLGKF 795
L MAG+ D +SA G LG F
Sbjct: 189 LMMAGIDDS-SSASGCTATLGNF 210
Score = 37.9 bits (84), Expect = 0.36
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +3
Query: 255 EWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*FLSSXPSLNDXVLXIMPVQKQT 434
+W+P+TKL LV K + + F L +R F P + KQT
Sbjct: 53 KWLPITKLGCLVKEMKIKSLEEIY-FFSLLSRNLRSLTFSWEHPLI-----------KQT 100
Query: 435 RAGQRTRFKAFVAIGDXXGHIGLGVK 512
Q+TRFKA V +G GH+ LG+K
Sbjct: 101 CTDQQTRFKASVTVGS-YGHVSLGIK 125
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 76.2 bits (179), Expect = 1e-12
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +1
Query: 523 EVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTGIV 702
EVA I+ IIL + V G G+ KP TV C VTG GSV++ LIP P T I
Sbjct: 125 EVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVIS 183
Query: 703 SAXVPKKLLXMAGVQDXYTSAXG 771
SA +PKKLL MAG+ D +TSA G
Sbjct: 184 SAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 72.9 bits (171), Expect = 1e-11
Identities = 39/66 (59%), Positives = 40/66 (60%)
Frame = +1
Query: 598 GNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGSX 777
GN IGK V C VTG CGSV V LIP GTGI SA VP K L MAG+ D YTSA G
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 778 WXLGKF 795
L F
Sbjct: 67 ASLDYF 72
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 67.3 bits (157), Expect = 5e-10
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXG 690
SKEV AIR AI A S+ V G G P ++P G CGSV V L+P P G
Sbjct: 99 SKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRG 158
Query: 691 TGIVSAXVPKKLLXMAGVQDXYTSAXG 771
G+V+ V K +L +AGV+D +T G
Sbjct: 159 VGLVAGNVAKAVLGLAGVKDAWTKTFG 185
Score = 40.7 bits (91), Expect = 0.051
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
P L + VL + VQ+ ++G+R R++A V +G+ G++G+G+
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGM 96
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 66.5 bits (155), Expect = 9e-10
Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 511 SCSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTG-KCGSVTVRLIPXPX 687
+CSKEV TA + AI L + S TG GN IG P T+PC VT + V V L P
Sbjct: 95 NCSKEVGTAAQRAITLLSFLFS-TQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPR 153
Query: 688 GTGIVSAXVPKKLLXMAGV 744
GTG VSA VPKKL +A +
Sbjct: 154 GTGTVSASVPKKLPLLASI 172
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 65.3 bits (152), Expect = 2e-09
Identities = 46/97 (47%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Frame = +3
Query: 195 LDGXXRGPGRGXGX------CKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI--N 350
L G RGPG G G K + KEW+P TKL LV K + + +F LPI +
Sbjct: 33 LRGQGRGPGHGRGRGRRARGSKAEDKEWIPFTKLGHLVKDMKIKSLEEIY-LFSLPIKGS 91
Query: 351 XIRDH*FLSSXPSLNDXVLXIMPVQKQTRAGQRTRFK 461
I D FL + SL + VL MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDF-FLGA--SLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 64.9 bits (151), Expect = 3e-09
Identities = 34/53 (64%), Positives = 36/53 (67%)
Frame = +1
Query: 637 VTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
VTG+CGSV VRL P GTGIVSA VPKKLL MA + D YT A G LG F
Sbjct: 126 VTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNF 177
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.9 bits (151), Expect = 3e-09
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +1
Query: 520 KEVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
KEV AIR AI A ++ + G +P +VP V GK GSV VRLIP P G
Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGL 163
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXG 771
G+V V KK+L +AGVQD ++ G
Sbjct: 164 GLVIGDVGKKILRLAGVQDVWSQTFG 189
Score = 39.9 bits (89), Expect = 0.089
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 EWVPVTKLXRLVXSRKNRXTXRAFTVFY-LPINXIRDH*FLSSXPSLNDXVLXIMPVQKQ 431
EW P TKL +V + F Y + I D N VL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEVLDIALTVRM 74
Query: 432 TRAGQRTRFKAFVAIGDXXGHIGLGV 509
T +G+R RF+ A+G+ G++GLG+
Sbjct: 75 TDSGRRVRFRVLAAVGNRDGYVGLGI 100
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 59.7 bits (138), Expect = 1e-07
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXG 690
+KE A AI+ AI A ++ + G GKP T+P V GK GSV+V L P P G
Sbjct: 88 AKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQG 147
Query: 691 TGIVSAXVPKKLLXMAGVQDXYTSAXG 771
G+ V K +L MAG+ D + A G
Sbjct: 148 VGLAVGDVVKVILRMAGIDDAWGFAAG 174
Score = 42.3 bits (95), Expect = 0.017
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +3
Query: 252 KEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*FLSSXPSLNDXVLXIMPVQKQ 431
+EW P T+L RLV + + + A LP+ + +L P L D V+ I Q+
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHS-KLPLKEYQIVDYL--IPDLKDEVINIERAQRM 59
Query: 432 TRAGQRTRFKAFVAIGDXXGHIGLG 506
T +G+R + +G+ G++G+G
Sbjct: 60 TDSGRRMNYSITAVVGNGNGYVGVG 84
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXG 690
+K++ AI+ AI A ++ V G G+P ++P V GK GSV V L+P P G
Sbjct: 96 AKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKG 155
Query: 691 TGIVSAXVPKKLLXMAGVQDXYTSAXG 771
TG+V V K LL AG++D +++ G
Sbjct: 156 TGLVVGSVLKTLLTYAGIKDAWSTTKG 182
Score = 40.3 bits (90), Expect = 0.067
Identities = 29/85 (34%), Positives = 40/85 (47%)
Frame = +3
Query: 252 KEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*FLSSXPSLNDXVLXIMPVQKQ 431
+EW P T + LV K F LPI L P L V+ I VQKQ
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDR-NLPITEPEIVDVL--LPKLKYEVVDIKVVQKQ 67
Query: 432 TRAGQRTRFKAFVAIGDXXGHIGLG 506
T AG+ +R+K V +G+ G++ +G
Sbjct: 68 TDAGEISRYKVLVIMGNMDGYVSIG 92
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 57.2 bits (132), Expect = 5e-07
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXG 690
SK++ AI A A +V+ + G + +VP V GK GSVT+ +IP P G
Sbjct: 129 SKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRG 188
Query: 691 TGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
G+V+ K+LL +AG++D +T+A GS
Sbjct: 189 LGLVAGGKIKRLLELAGLKDAWTTAKGS 216
Score = 43.2 bits (97), Expect = 0.010
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
P L V+ + +QK T GQ TRFKA VA G+ G++G+G
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIG 125
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 56.4 bits (130), Expect = 1e-06
Identities = 41/94 (43%), Positives = 49/94 (52%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSK+ ATAI +L V G +G TV C VTG+C SV + LIP
Sbjct: 138 CSKKTATAI----VL-------VWKGTRETRLGS-LTVSCKVTGQCVSVLICLIPPTRN- 184
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
I+SA VPKKLL +A + D YTSA G L F
Sbjct: 185 -IISAPVPKKLLLLANIDDCYTSARGCTATLDNF 217
Score = 41.1 bits (92), Expect = 0.038
Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGRGXGXC---KEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINXIRDH*F 371
G RG GRG G + + K+W+PV KL LV R R F++ I F
Sbjct: 41 GRGRGRGRGRGSACGGQAEDKQWMPVIKLCHLV--RTWRYRDLPFSLLNKKSMIIGF--F 96
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L + SL D IMPVQ QT R FK FV+I D H+ L K
Sbjct: 97 LRT--SLRD---EIMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDK 137
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +1
Query: 676 PXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
P P GTGIVSA VPKKLL MAG+ D YTSA G LG F
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF 40
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = -1
Query: 788 PRXXXXPXAEVXQSCTPAX*XSFLGTXADTIPVPXGSGISRTVTEPHLPVTLQGTVXGFP 609
P+ P A V QS P+ FLGT A+ +PVP G+G+ T TEP P+TL G + G
Sbjct: 14 PKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGAC 72
Query: 608 XLLPQXPVXTXETD 567
LLP PV + D
Sbjct: 73 CLLP--PVASTHRD 84
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 55.6 bits (128), Expect = 2e-06
Identities = 27/85 (31%), Positives = 46/85 (54%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
S + I+ A+ A +++ + G GKP T+ +GK GSV V + P P GTG
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTG 209
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXG 771
IV++ +L ++G++D +T + G
Sbjct: 210 IVASKFQLNVLKISGIRDCFTKSFG 234
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 387 SLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVKLQQGSR 530
SL V+ + V + T++G++ + K V +GD GH+GLGVK S+
Sbjct: 107 SLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSK 154
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 54.8 bits (126), Expect = 3e-06
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +1
Query: 520 KEVATAIRGAIILANXSVSXVXTGXXG-NXIGKPXT-VPCXVTGKCGSVTVRLIPXPXGT 693
KEVA+ IR AI A ++ V G G P T VP +TG+ GS V L+P P G
Sbjct: 76 KEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAPAGK 135
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXG 771
G+V + +++L +AGV D ++ + G
Sbjct: 136 GLVVSDYGRRVLTLAGVTDVWSRSAG 161
Score = 40.7 bits (91), Expect = 0.051
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
P L+D VL + +Q+ T +G+R RF +G+ G++GL +
Sbjct: 31 PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAI 72
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 54.8 bits (126), Expect = 3e-06
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 523 EVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
+V AI+ AI +A ++ V G G+P TV GK GSV V L P P G G
Sbjct: 92 QVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLG 151
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
+ +K+L +AG++D +T + G+
Sbjct: 152 LAGGETVRKVLELAGIEDIWTRSSGN 177
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIG 500
P L D VL I VQ+ T +G+R +F+ VA+G+ G IG
Sbjct: 46 PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 52.8 bits (121), Expect = 1e-05
Identities = 35/84 (41%), Positives = 42/84 (50%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATA +G + + + + V VT GSV V LIP P GT
Sbjct: 31 CSKEVATAFQGLWVKMQLGETR---------LSRSTLVQYKVTSHYGSVLVHLIPAPRGT 81
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSA 765
GIVSA V K L AG+ + Y SA
Sbjct: 82 GIVSAPVLTKFLMNAGIYNCYISA 105
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 423 QKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
QKQT+ GQ+ R K F GD GH+GLG+K
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIK 30
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
+VP V GK GSV + ++P P G G+V+ ++LL +AG++D YT+A GS
Sbjct: 147 SVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGS 197
Score = 42.7 bits (96), Expect = 0.013
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
P L V+ + +QK T GQ TRFKA VA G+ G++G+G
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIG 106
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 52.4 bits (120), Expect = 2e-05
Identities = 43/101 (42%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +3
Query: 210 RGPGRGXGXCKEDXKEW-VPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*FLSS 380
RG RG G K+ + PVTKL RLV K + + F F + I I DH LS
Sbjct: 17 RGAPRGRGARKDGASDGRTPVTKLGRLVKDGKVKSIDQIFE-FGIKIKEYQIVDH-LLSR 74
Query: 381 XPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGL 503
L + V+ I VQKQT G+ R KA VAIGD GH L
Sbjct: 75 ---LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 50.0 bits (114), Expect = 8e-05
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 523 EVATAIRGAIILANXSVSXVXTGXXG--NXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
+V AI+ AI +A ++ V G + G ++ GK GSVTV + P P G G
Sbjct: 143 QVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLG 202
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
+ +A + +L +AGV+D +T++ G+
Sbjct: 203 LAAAETVRNILELAGVEDAWTNSDGN 228
Score = 40.7 bits (91), Expect = 0.051
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIG 500
P L D VL I VQ+ T +G+R +F+ VA+G+ G++G
Sbjct: 97 PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLG 135
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +3
Query: 330 VFYLPINXIRDH*FLSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+F LPI FL P L D VL +M VQKQ +AG+R RFK V I D ++ LGV
Sbjct: 144 LFSLPIKEFEVTDFLLGVP-LKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGV 202
Query: 510 K 512
+
Sbjct: 203 E 203
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 610 GKPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXG 771
G P ++P V GK GSV V L P P G GIV+ KK+ +AG++D + + G
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFG 189
Score = 35.9 bits (79), Expect = 1.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 423 QKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
QK+T G +TR++ +GD GH+G+G+
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGL 100
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 43.2 bits (97), Expect = 0.010
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 201 GXXRGPGRGXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPI 347
G RG GRG K + KEW+PVTKL RLV K + + +F LPI
Sbjct: 41 GRGRGRGRGARGGKAEDKEWMPVTKLGRLVKDMKIKSLEEIY-LFSLPI 88
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 43.2 bits (97), Expect = 0.010
Identities = 35/92 (38%), Positives = 45/92 (48%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSK+V TA+ G ++ S + GN I KP T PC TG S++ L P
Sbjct: 73 CSKKVGTAV-GLSSWSSFLSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF 127
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLG 789
IVS VP+KL+ A + YTSA LG
Sbjct: 128 -IVSVLVPRKLMLRASIDSCYTSARSYTVTLG 158
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 43.2 bits (97), Expect = 0.010
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 613 KPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
K T+P + GK G+ T+ + P GTG+++ +++L + GV D T GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 34.3 bits (75), Expect = 4.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVKLQQG 524
+ +L I V K T+ G+ F A+GD G IGLG+ G
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANG 53
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 42.7 bits (96), Expect = 0.013
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
S EV AI+ AI AN ++ V G+ + V G+ G+ V L+P P GTG
Sbjct: 91 SIEVPDAIKKAIKNANNNLIKVKQTKKGS-------IYHDVNGRHGAAKVMLLPAPEGTG 143
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
I++ + ++ +AG D YT + G+
Sbjct: 144 IIAGGPVRAVVELAGFTDIYTKSRGA 169
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 387 SLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ + V+ I + K T+ G+ RF A V IGD G +G G+
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGM 88
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 41.1 bits (92), Expect = 0.038
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 613 KPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
K T+P V GK S V L P GTGI++ + ++ AG+QD T + GS
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGS 149
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 40.3 bits (90), Expect = 0.067
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
T+P + G+ GS V + P GTG++S + +L +AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 390 LNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
L + V+ + V K + G+R RF A V +GD GH+G G
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFG 50
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 39.5 bits (88), Expect = 0.12
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +1
Query: 520 KEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTGI 699
+EVATA++ A++ A SV V G T+P V K + ++P GTG+
Sbjct: 556 REVATAVKRALVDAKKSVVRVPLVGAG-------TIPHRVEAKFNAARCVMVPAADGTGV 608
Query: 700 VSAXVPKKLLXMAGVQDXYTSAXG 771
++ + +L +AGVQ+ G
Sbjct: 609 LAGSSIRSVLELAGVQNVLAKRIG 632
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 688 GTGIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
G+ +V+ VPKK+L AG++D +TS+ GS L F
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 637 VTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXG 771
V G+ G+ V L P P GTGI++ + ++ +AG D YT G
Sbjct: 140 VIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 37.9 bits (84), Expect = 0.36
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
++EV AIR AI A ++ V G T+P V G+ + V L P GTG
Sbjct: 57 AREVPEAIRKAISAAKRNIVEVPV-ING-------TIPHEVIGRQDASKVLLKPAAPGTG 108
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
I++ + ++ +AG+Q+ T + GS
Sbjct: 109 IIAGGTVRAVVELAGIQNILTKSLGS 134
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 37.9 bits (84), Expect = 0.36
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
TVP V G G+ + ++P GTG+V+ K + +AG D T GS
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGS 147
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 37.5 bits (83), Expect = 0.47
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 384 PSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
P + VL + + K + G+ F+A VA+GD G IGLG
Sbjct: 69 PRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLG 109
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 37.5 bits (83), Expect = 0.47
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 378 SXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
S L + ++ + + K T+ G+ RF A IGD G++G G+
Sbjct: 74 SVTGLEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGL 117
Score = 36.7 bits (81), Expect = 0.83
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
S EV AIR A+ A ++ V + K T+ V GK G+ V + P P GTG
Sbjct: 120 SIEVPVAIRKALKSAKNNMYKVK-------MNKNFTLYHEVIGKHGAGKVLIKPAPKGTG 172
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXG 771
+++ K +L + G +D Y+ G
Sbjct: 173 VIAGGPIKVVLELCGFKDVYSKNLG 197
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 37.1 bits (82), Expect = 0.62
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 330 VFYLPINXIRDH*FLSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+F PI FL P L D VL +M V+KQ AG+ RFK V I ++ LGV
Sbjct: 10 LFSRPIKEFEVTDFLLEVP-LKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGV 68
Query: 510 K 512
+
Sbjct: 69 E 69
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 36.7 bits (81), Expect = 0.83
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXG 771
TVP V G G+ V + P GTG+++ + ++ +AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
+ V+ I V K T+ G+ RF A V +GD G +GLG
Sbjct: 45 EKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLG 81
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 36.7 bits (81), Expect = 0.83
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 607 IGKPXTVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
+ K ++P ++G G+ V L P GTG+++ + +L +AG+++ + GS
Sbjct: 131 LNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGS 186
Score = 33.9 bits (74), Expect = 5.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ V+ I V K + G++ F+A + +GD G +G+GV
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGV 105
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 36.3 bits (80), Expect = 1.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
T+P + G+ + V L P GTG+++ VP+ + +AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
T+P V K G V L P GTG+++ + +L +AGV+D + G+
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGA 134
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
++P V G+ G+ V LIP GTGI++ + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ ++ I V K T+ G++ F+A V IGD G +G+GV
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGV 65
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 34.7 bits (76), Expect = 3.3
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 517 SKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGTG 696
+KEV A++ + I A ++ V + K T P G G+ V L P GTG
Sbjct: 189 AKEVVAAVQKSAIDARRNIVQVP-------MTKYSTFPHRSEGDYGAAKVMLRPASPGTG 241
Query: 697 IVSAXVPKKLLXMAGVQDXYTSAXGS 774
+++ + +L MAGV++ GS
Sbjct: 242 VIAGGAVRIVLEMAGVENALGKQLGS 267
Score = 33.9 bits (74), Expect = 5.8
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLG 506
+ V+ + V K + G++ +F+A V +GD G++G+G
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVG 185
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 34.3 bits (75), Expect = 4.4
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 622 TVPCXVTGKCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
TVP K + V L P P G GI+++ + ++ +AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 33.9 bits (74), Expect = 5.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ V+ + V K + G++ F+A V +GD G +G+GV
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGV 223
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 33.5 bits (73), Expect = 7.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 396 DXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGV 509
+ V+ I V K + G++ F+A V +G+ G +G+GV
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGV 56
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 33.5 bits (73), Expect = 7.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 646 KCGSVTVRLIPXPXGTGIVSAXVPKKLLXMAGVQDXYTSAXGS 774
K G+ + + P P GTGIV+ +K M GV D + GS
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGS 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,560,773
Number of Sequences: 1657284
Number of extensions: 8443993
Number of successful extensions: 12840
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 12456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12814
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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