Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_B04
(914 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 140 2e-33
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 140 2e-33
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 140 2e-33
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 140 2e-33
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 139 4e-33
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 140 bits (340), Expect = 2e-33
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA SV V G GN IGKP TVPC VTGKCGSV+VRLIP P GT
Sbjct: 126 CSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VPKKLL MAG++D YTSA GS LG F
Sbjct: 186 GIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 108 bits (260), Expect = 9e-24
Identities = 67/107 (62%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGR-GXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*F 371
G RG GR G KED KEWVPVTKL RLV K + + ++ LPI I D F
Sbjct: 23 GRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIY-LYSLPIKEFEIIDF-F 80
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L S SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GHIGLGVK
Sbjct: 81 LGS--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 125
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2
Query: 779 GTLGNFXXXTYAAIXXXYAYLXP 847
GTLGNF TYAAI YAYL P
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTP 236
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 140 bits (340), Expect = 2e-33
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA SV V G GN IGKP TVPC VTGKCGSV+VRLIP P GT
Sbjct: 126 CSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VPKKLL MAG++D YTSA GS LG F
Sbjct: 186 GIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 108 bits (260), Expect = 9e-24
Identities = 67/107 (62%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGR-GXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*F 371
G RG GR G KED KEWVPVTKL RLV K + + ++ LPI I D F
Sbjct: 23 GRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIY-LYSLPIKEFEIIDF-F 80
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L S SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GHIGLGVK
Sbjct: 81 LGS--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 125
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2
Query: 779 GTLGNFXXXTYAAIXXXYAYLXP 847
GTLGNF TYAAI YAYL P
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTP 236
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 140 bits (340), Expect = 2e-33
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA SV V G GN IGKP TVPC VTGKCGSV+VRLIP P GT
Sbjct: 126 CSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VPKKLL MAG++D YTSA GS LG F
Sbjct: 186 GIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 108 bits (260), Expect = 9e-24
Identities = 67/107 (62%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGR-GXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*F 371
G RG GR G KED KEWVPVTKL RLV K + + ++ LPI I D F
Sbjct: 23 GRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIY-LYSLPIKEFEIIDF-F 80
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L S SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GHIGLGVK
Sbjct: 81 LGS--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 125
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2
Query: 779 GTLGNFXXXTYAAIXXXYAYLXP 847
GTLGNF TYAAI YAYL P
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTP 236
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 140 bits (340), Expect = 2e-33
Identities = 70/94 (74%), Positives = 73/94 (77%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA SV V G GN IGKP TVPC VTGKCGSV+VRLIP P GT
Sbjct: 126 CSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VPKKLL MAG++D YTSA GS LG F
Sbjct: 186 GIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 108 bits (260), Expect = 9e-24
Identities = 67/107 (62%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGR-GXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*F 371
G RG GR G KED KEWVPVTKL RLV K + + ++ LPI I D F
Sbjct: 23 GRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIY-LYSLPIKEFEIIDF-F 80
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L S SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GHIGLGVK
Sbjct: 81 LGS--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 125
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2
Query: 779 GTLGNFXXXTYAAIXXXYAYLXP 847
GTLGNF TYAAI YAYL P
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTP 236
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 139 bits (337), Expect = 4e-33
Identities = 69/94 (73%), Positives = 73/94 (77%)
Frame = +1
Query: 514 CSKEVATAIRGAIILANXSVSXVXTGXXGNXIGKPXTVPCXVTGKCGSVTVRLIPXPXGT 693
CSKEVATAIRGAIILA SV V G GN IGKP TVPC VTGKCGSV+VRLIP P GT
Sbjct: 126 CSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGT 185
Query: 694 GIVSAXVPKKLLXMAGVQDXYTSAXGSXWXLGKF 795
GIVSA VP+KLL MAG++D YTSA GS LG F
Sbjct: 186 GIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 108 bits (260), Expect = 9e-24
Identities = 67/107 (62%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 GXXRGPGR-GXGXCKEDXKEWVPVTKLXRLVXSRKNRXTXRAFTVFYLPINX--IRDH*F 371
G RG GR G KED KEWVPVTKL RLV K + + ++ LPI I D F
Sbjct: 23 GRGRGRGRWARGRGKEDSKEWVPVTKLGRLVREGKIKSLEEIY-LYSLPIKEFEIIDF-F 80
Query: 372 LSSXPSLNDXVLXIMPVQKQTRAGQRTRFKAFVAIGDXXGHIGLGVK 512
L S SL D VL IMPVQKQTRAGQRTRFKAFVAIGD GHIGLGVK
Sbjct: 81 LGS--SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 125
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2
Query: 779 GTLGNFXXXTYAAIXXXYAYLXP 847
GTLGNF TYAAI YAYL P
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTP 236
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,483,779
Number of Sequences: 53049
Number of extensions: 419531
Number of successful extensions: 701
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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