Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_B02
         (969 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    31   1.8  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.6  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     29   5.6  
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238     28   9.7  

>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = +1

Query: 592 ACGIPXXLXGLLGXQTQXPRPXEXXXQXPPXXXFHAXTHPXPPXXXLSPRRPP 750
           A GI   L G  G     P P       PP    H   HP PP    +PR PP
Sbjct: 206 AAGIKPKLKGPKGAPPPPPPP-------PPSPHRHPAAHPPPPPHHPAPRPPP 251


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +1

Query: 634 QTQXPRPXEXXXQXPPXXXFHAXTHPXPPXXXLSPRRPPXWXPXHVPKP 780
           Q Q P P +   Q PP    +      PP     P  PP   P   P P
Sbjct: 79  QQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPP 127


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/51 (27%), Positives = 17/51 (33%)
 Frame = +1

Query: 628 GXQTQXPRPXEXXXQXPPXXXFHAXTHPXPPXXXLSPRRPPXWXPXHVPKP 780
           G + + P+P       PP         P  P     P  P  W P   PKP
Sbjct: 184 GPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGPPQPWWPIPFPKP 234


>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
          Length = 697

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 125 PRPPKKPPHYFWNSSEAERPXPP 57
           P PP  PP     ++EAERP PP
Sbjct: 18  PPPPPPPPPAKAAAAEAERPCPP 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,391,623
Number of Sequences: 37544
Number of extensions: 235210
Number of successful extensions: 635
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)