Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A24
         (980 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.     32   2.8  
AB011076-1|BAA33463.1|  341|Homo sapiens UTF1 protein.                 32   3.7  
AY606112-1|AAT38949.1|  346|Homo sapiens ES protein protein.           31   4.9  
AL445199-6|CAI17342.1|  341|Homo sapiens undifferentiated embryo...    31   4.9  

>AK131081-1|BAC85131.1|  440|Homo sapiens FLJ00280 protein protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 488 PGTVKRPRCWRFSIGSAPLXEHHKNRRSSQRWRNPDRTIKIPXRFPPWXAPSLRS-PXFR 664
           PGT+  PR   +  G +PL  H    R +   RN      +P   PPW  PS R+ P  R
Sbjct: 35  PGTLPPPRTHSYLPGHSPLLGHTPTSRDTPPSRN-----TLP---PPWMLPSPRTLPSPR 86

Query: 665 XLXALXAYPVP 697
            L +    P P
Sbjct: 87  TLPSPRTLPTP 97


>AB011076-1|BAA33463.1|  341|Homo sapiens UTF1 protein.
          Length = 341

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = +3

Query: 468 SKRPAKGQEP*KGRVAGVFXXXXXXXTSITKIDAQVRG-GETPTGL*RYXPVSPPGKLPR 644
           S  P K  +  + R +          T I +  A VRG G  P    R  P SPPG+   
Sbjct: 205 SPSPPKSADASRARGSPPAPAPTALATCIPEDRAPVRGPGSPPPPPAREDPDSPPGRPED 264

Query: 645 CAXPXSXPXPLXXHTLSXLXPL 710
           CA P + P  L    L  L  L
Sbjct: 265 CAPPPAAPPSLNTALLQTLGHL 286


>AY606112-1|AAT38949.1|  346|Homo sapiens ES protein protein.
          Length = 346

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 546 TSITKIDAQVRG-GETPTGL*RYXPVSPPGKLPRCAXPXSXPXPLXXHTLSXLXPL 710
           T I +  A VRG G  P    R  P SPPG+   CA P + P  L    L  L  L
Sbjct: 236 TCIPEDRAPVRGPGSPPPPPAREDPDSPPGRPEDCAPPPAAPPSLNTALLQTLGHL 291


>AL445199-6|CAI17342.1|  341|Homo sapiens undifferentiated embryonic
           cell transcription factor 1 protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 4.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 546 TSITKIDAQVRG-GETPTGL*RYXPVSPPGKLPRCAXPXSXPXPLXXHTLSXLXPL 710
           T I +  A VRG G  P    R  P SPPG+   CA P + P  L    L  L  L
Sbjct: 231 TCIPEDRAPVRGPGSPPPPPAREDPDSPPGRPEDCAPPPAAPPSLNTALLQTLGHL 286


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,023,800
Number of Sequences: 237096
Number of extensions: 2190679
Number of successful extensions: 6648
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6314
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13102819592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)