Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A15
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           23   5.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   5.0  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   5.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   5.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.7  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = +1

Query: 253 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTA 360
           R+++  +GK+ +  +    + V++LY  P+   + A
Sbjct: 76  RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAA 111


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 670 PLRXSSPLMMSPWAG 714
           PLR   PL + PW G
Sbjct: 74  PLRFRKPLPIEPWHG 88


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 221 IKYLLRQVFNKKKHSGFRQERISISTYCL*EIDYCYLLIY 102
           I  LL  VF   K SG+   R   ++YCL   D C+   Y
Sbjct: 9   IAVLLAIVFLFDKCSGYPSIRQGTTSYCLGCGDSCHKCKY 48


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 670 PLRXSSPLMMSPWAG 714
           PLR   PL + PW G
Sbjct: 74  PLRFRKPLPIEPWHG 88


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 524 PDPPTSGCLPKSATTPTXAC 583
           PD P  GC  K+  + T  C
Sbjct: 428 PDDPPIGCECKTCNSKTKCC 447


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,613
Number of Sequences: 438
Number of extensions: 5272
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)