Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_A14
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.019
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.057
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.13
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.005
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 708 TPAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTP 887
T AP + P SP P P P P + +P P + PS P P+ P
Sbjct: 141 TSAPPRPSIPPP-SPASAPPIPSKAPPIP--SSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 888 XXRPPPPP 911
+ PPPP
Sbjct: 198 PPKVPPPP 205
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 762 PXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTPXXRPPPPP 911
P P + PTP IP P P P P P PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.019
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 705 RTPAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPT 884
RT P + TP P P P P+ P P P P PA P
Sbjct: 411 RTSTPPVP-TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 885 PXXRPPPPP 911
P P PPP
Sbjct: 470 PPAAPAPPP 478
Score = 33.1 bits (72), Expect = 0.057
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 609 PVKRPXXPAXSXXXXXXXXXXXXXSTPHLXRWRTPAPALSNTPTXXSPXXXPXXPLXLXP 788
P P P S STP + TP + P P P P+
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVP---TPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 789 TPPXT-GIPXPXSXPXGTRRXPSXPXTPARXPTPXXRPPPPP 911
PP P P G P+ P P P P P P P
Sbjct: 446 APPLPPSAPIAPPLPAGM---PAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 PAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPX---PXSXPXGTRRXPSXPXTPARXP 881
P P S T P P P IP P P G S P P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 882 TPXXRPPPPP 911
P PP P
Sbjct: 423 LPPSAPPSLP 432
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 872 GGXXGXGRXAXRXXGXGGRXRDXGXRRGRGEXEGXXGXXXGG 747
GG G R R GGR G R GRG G G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 916 GXGGGGGRXXGVGXRAGVXGWEGXRRVPXGXEXGXGXPVXGG 791
G G GG R G G G G G R G G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 762 PXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTPXXRP--PPPP 911
P P+ P P + P S P S P P+ P P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +3
Query: 711 PAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTPX 890
PA +S P P P PP +P P S P PS P P +
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPM-SVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Query: 891 XRPPP 905
P P
Sbjct: 1742 SVPNP 1746
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/75 (26%), Positives = 25/75 (33%)
Frame = +3
Query: 684 TPHLXRWRTPAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPX 863
TP + T + ++ PT S PL T T P P G P P
Sbjct: 248 TPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIP---PTGNSTTPVTPT 304
Query: 864 TPARXPTPXXRPPPP 908
P + PPPP
Sbjct: 305 VPPTSTSSTSTPPPP 319
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/75 (25%), Positives = 23/75 (30%)
Frame = +3
Query: 684 TPHLXRWRTPAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPX 863
TP + T + + P S PL T T P P G P P
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIP---PTGNSTTPVTPT 358
Query: 864 TPARXPTPXXRPPPP 908
P + PPPP
Sbjct: 359 VPPTSTSSTSTPPPP 373
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/106 (24%), Positives = 28/106 (26%), Gaps = 3/106 (2%)
Frame = +3
Query: 603 PXPVKRPXXPAXSXXXXXXXXXXXXXSTPHLXRWRTPAPALSNTPTXXSPXXX-PXXPLX 779
P P P PA S P P PA S P P P P+
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 780 --LXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTPXXRPPPPP 911
P P + P P G P P P PP P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = +3
Query: 711 PAPALSNTPTXXSPXXXPXXP---LXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXP 881
P P+++ P P P + P PP + P G P P T P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP-PPSTAPPVP 1220
Query: 882 TPXXRPPPPP 911
TP PP P
Sbjct: 1221 TPSAGLPPVP 1230
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/67 (25%), Positives = 22/67 (32%)
Frame = +3
Query: 711 PAPALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSXPXTPARXPTPX 890
P P LS+ P+ + T P +P P S P + P P P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPP--VPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 891 XRPPPPP 911
P P
Sbjct: 1071 SEIPSIP 1077
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/77 (25%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +3
Query: 681 STPHLXRWRTPAP-ALSNTPTXXSPXXXPXXPLXLXPTPPXTGIPXPXSXPXGTRRXPSX 857
STP + + + AP A P S P P P +GIP P
Sbjct: 1048 STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Query: 858 PXTPARXPTPXXRPPPP 908
P P PP P
Sbjct: 1108 SVAVPPVPAPSGAPPVP 1124
Score = 26.2 bits (55), Expect = 6.5
Identities = 35/132 (26%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Frame = +3
Query: 537 PXSTESGXXP-RKEHVXXXPTSGPXPVKRPXXPAXSXXXXXXXXXXXXXSTPHLXRWRTP 713
P SG P K V P P V P PA S P + P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPS-VAVPPVPAPSGAPPVPKPSVAAPPVP-VPSGAPP 1141
Query: 714 APALS-NTPTXXSPXXXPXXP---LXLXPTP-PXTGIPXPXSXPXGTRRXPSXPXTP-AR 875
P S P +P P P + P P P +GIP G P P
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 876 XPTPXXRPPPPP 911
P+ P PPP
Sbjct: 1202 KPSVGVPPVPPP 1213
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 858 PXTPARXPTPXXRPPPPP 911
P TPA P PPPPP
Sbjct: 731 PPTPAPTPAVKHHPPPPP 748
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,820,257
Number of Sequences: 5004
Number of extensions: 21268
Number of successful extensions: 152
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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