Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A11
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0652 - 18424489-18424525,18424639-18424702,18424796-184248...   177   1e-44
11_04_0279 + 15722183-15722273,15722927-15722986,15724053-157243...   174   7e-44
05_06_0163 - 26082276-26082369,26082751-26082814,26082899-260829...   155   6e-38
09_06_0073 + 20687057-20687246,20689004-20689203,20689786-206899...    91   1e-18
08_02_1489 + 27490143-27490365,27490731-27490732,27491606-274916...    88   1e-17
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545...    29   3.8  
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731...    29   5.0  
07_01_0876 - 7271317-7271796,7272087-7272275,7272603-7272926,727...    29   6.6  
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106...    29   6.6  
02_02_0270 + 8431503-8431830,8431961-8432149,8434288-8434412,843...    29   6.6  
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392...    28   8.7  

>04_03_0652 -
           18424489-18424525,18424639-18424702,18424796-18424869,
           18425809-18425924,18426078-18426343,18427659-18427749
          Length = 215

 Score =  177 bits (431), Expect = 1e-44
 Identities = 81/156 (51%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
 Frame = +3

Query: 297 YNTVMKLVFIFTSYATIYLM--YVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVL 470
           YNTVMK++F+ +S++ ++ +  +   + +YD +HDTFR +FL++P F+LALLI+ +FT  
Sbjct: 59  YNTVMKMIFLGSSFSIVWYIRRHKMVRRSYDKDHDTFRHQFLVLPCFLLALLIHEKFTFR 118

Query: 471 EVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHY 650
           EV+WTFSIYLE+VAILPQL L+ +TR  +++T  Y+F L +YRALY+LNW YRY  E HY
Sbjct: 119 EVMWTFSIYLEAVAILPQLVLLQRTRNVDNLTGQYVFFLGAYRALYILNWAYRYFTEPHY 178

Query: 651 -ELIAIISGVVQTILYCDFFYLYITKVLKGKXLQLP 755
              I  ISG VQT+LY DFFY Y+  +     L LP
Sbjct: 179 VHWITWISGFVQTLLYADFFYYYLNSLKNNVKLTLP 214



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +2

Query: 122 MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVS 292
           MN FRL GD                 +SCAG+S K+Q L+++V+ TRYLD+ T  +S
Sbjct: 1   MNAFRLAGDMTHIMSVLVLLLKIHTIKSCAGVSLKTQELYALVFATRYLDIFTDFIS 57


>11_04_0279 +
           15722183-15722273,15722927-15722986,15724053-15724318,
           15724771-15724886,15725173-15725246,15725330-15725393,
           15725473-15725509
          Length = 235

 Score =  174 bits (424), Expect = 7e-44
 Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
 Frame = +3

Query: 297 YNTVMKLVFIFTSYATIYLM--YVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVL 470
           YNTVMKLVF+ +S++ ++ M  +   + TYD +HDTFR  FL++P   LALLIN  FT  
Sbjct: 79  YNTVMKLVFLASSFSIVWYMRRHKIVRRTYDKDHDTFRHHFLVLPCLALALLINERFTFR 138

Query: 471 EVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHY 650
           EV+W FSIYLE+VAILPQL L+ +TR  +++T  Y+F L +YR LY+LNW+YRY  E H+
Sbjct: 139 EVMWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFTEPHF 198

Query: 651 -ELIAIISGVVQTILYCDFFYLYITKVLKGKXLQLP 755
              I+ ++G+VQT+LY DFFY YI        L+LP
Sbjct: 199 VHWISWVAGIVQTLLYADFFYYYIMSWKNNVKLELP 234



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 212 GISGKSQILFSVVYTTRYLDLLTTHVS 292
           GIS K+Q L+++V+  RYLDL    +S
Sbjct: 51  GISLKTQELYALVFAARYLDLFIHFIS 77


>05_06_0163 -
           26082276-26082369,26082751-26082814,26082899-26082972,
           26083644-26083759,26084644-26084909,26085002-26085092
          Length = 234

 Score =  155 bits (375), Expect = 6e-38
 Identities = 73/143 (51%), Positives = 99/143 (69%), Gaps = 3/143 (2%)
 Frame = +3

Query: 297 YNTVMKLVFIFTSYATIYLM--YVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVL 470
           YN+VMK+VFI +S A ++ M  + + + TYD + DTFR   L+   F+LALL N  FT  
Sbjct: 59  YNSVMKVVFITSSAAIVWCMRRHPQVRRTYDKDQDTFRHVVLVAAAFVLALLFNERFTFR 118

Query: 471 EVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHY 650
           E+ W FSIYLE+VAILPQL L+ ++R  +++T  Y+F L +YRA Y+LNW+YRY  E H+
Sbjct: 119 EICWAFSIYLEAVAILPQLVLLQRSRNVDNLTGQYVFFLGAYRAFYILNWIYRYFTEGHH 178

Query: 651 -ELIAIISGVVQTILYCDFFYLY 716
              I  I+G+VQT LY DFFY Y
Sbjct: 179 SRWIPWIAGLVQTALYADFFYYY 201



 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +2

Query: 122 MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVS 292
           MN FR LGD              + ++SC+G+S K+Q L+ +V+  RY+DL T ++S
Sbjct: 1   MNAFRFLGDMTHLFSVLVLLLKIYATKSCSGVSRKTQELYMLVFVARYMDLFTDYIS 57


>09_06_0073 +
           20687057-20687246,20689004-20689203,20689786-20689926,
           20689995-20690075,20690564-20690688,20690763-20690807,
           20691853-20691877,20692282-20693073
          Length = 532

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 14/166 (8%)
 Frame = +3

Query: 300 NTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFT---VL 470
           +TV+    +  +   IY++  K + TY  + D F + ++++P  +LALLI+   +   V 
Sbjct: 92  HTVLDTATLAATLFVIYMIRFKLRPTYMVDKDNFALYYVVVPCAVLALLIHPSTSHNIVN 151

Query: 471 EVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVY-------R 629
            + W F +YLE+V++LPQL L+  T+  E  T+HY+FAL   R L   +WV        R
Sbjct: 152 RISWAFCVYLEAVSVLPQLRLMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGR 211

Query: 630 YVVESHYEL---IAIISGVVQTILYCDFFYLYITKVLKGK-XLQLP 755
            +    Y L   + ++S +VQT +  DF Y Y+  ++ G+  L+LP
Sbjct: 212 LLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLP 257


>08_02_1489 +
           27490143-27490365,27490731-27490732,27491606-27491651,
           27491892-27492091,27492505-27492645,27492730-27492810,
           27493353-27493477,27493552-27493600
          Length = 288

 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 14/166 (8%)
 Frame = +3

Query: 300 NTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFT---VL 470
           +T++    +  +   IY++  K ++TY  + D F + ++++P   LALL++   +   + 
Sbjct: 119 HTILDTATLAATLFVIYMIRFKLRSTYMLDKDNFALYYVVLPCAGLALLVHPSTSHNIIN 178

Query: 471 EVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVY-------R 629
            + W F +YLE+V++LPQL L+  T+  E  T+HY+FAL   R L   +WV        R
Sbjct: 179 RISWAFCVYLEAVSVLPQLRLMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGR 238

Query: 630 YVVESHYEL---IAIISGVVQTILYCDFFYLYITKVLKGK-XLQLP 755
            +    Y L   + ++S +VQT +  DF Y Y+  V  G+  L+LP
Sbjct: 239 LLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSVFGGQLVLRLP 284


>02_05_0941 + 32953065-32953089,32954252-32954406,32954486-32954587,
            32955089-32955140,32955237-32955349,32955542-32955610,
            32955942-32956049,32956517-32956661,32957245-32957476,
            32957567-32957853,32957951-32958087,32958520-32958667,
            32959464-32959595,32960239-32960367,32960707-32960834,
            32960911-32961075,32961462-32961587,32962088-32962161,
            32962285-32962534,32962875-32963054,32963128-32963361,
            32964771-32964840,32965065-32965177,32965403-32965511,
            32965639-32965688,32965823-32965889,32966131-32966203,
            32966393-32966448,32966729-32966831,32967377-32967458,
            32967717-32967779,32967918-32967977,32968356-32968448,
            32968561-32968623,32968699-32968797
          Length = 1363

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 24/108 (22%), Positives = 48/108 (44%)
 Frame = +3

Query: 282  LMCPRYNTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEF 461
            L+C     ++ L  IF  Y    +  V+ +  YD +    R+  L   T    +      
Sbjct: 1082 LLCSSNVIILILTGIFQQYWVHQVRKVRLQGYYDFSEKLKRLAQLPFATVASGVAS---- 1137

Query: 462  TVLEVLWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRAL 605
             +L ++W   +++ SV++L ++ +V +   A    S YL+ +  Y +L
Sbjct: 1138 MLLIIVWQPLVHILSVSLLLRIAIVVEAICAGCFMSLYLWHIHKYNSL 1185


>03_02_0917 +
           12372122-12372422,12372487-12372524,12373103-12373186,
           12373796-12374504,12374641-12374729,12374834-12374903,
           12374977-12375060,12375097-12375239,12375337-12375418,
           12375605-12375687,12375769-12375835,12376287-12376376,
           12377631-12377737,12377862-12377969
          Length = 684

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 413 KFNPECVMVVIIGGLKLDIHQINSCIG 333
           K+ PEC  V +I  L LD+ +I  C+G
Sbjct: 364 KYTPECA-VHVIKSLGLDVEKIKKCVG 389


>07_01_0876 -
           7271317-7271796,7272087-7272275,7272603-7272926,
           7273028-7273261
          Length = 408

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -3

Query: 365 LDIHQINSCIGGKDEHQLHDSVIXGTHEL*VDPNNVSCIPLKTESETFLI 216
           +DI +I    G     Q+HD V+  T++L  +   V+ +PL +E E  L+
Sbjct: 138 VDIGRICENDGQVHACQVHDMVLEFTNQLSAEEGFVAAMPLDSEKEGILV 187


>05_01_0158 -
           1067721-1067827,1067951-1068008,1068276-1068334,
           1069009-1069087,1069177-1069233,1069531-1069580,
           1069805-1069886,1070431-1070487,1070741-1070828,
           1071171-1071247,1071325-1071443,1071719-1071950
          Length = 354

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +3

Query: 516 LPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHYELIAIISGVVQTILY 695
           +P +F V  TR+   + S  +FA+   R+LY+L       ++     I I+ G + T + 
Sbjct: 258 IPAVFGV--TRDPLIVLSSNIFAISGLRSLYVLISESMSELDYLQPAIGIVLGFIGTKMV 315

Query: 696 CDFFYLYI 719
            DFF  +I
Sbjct: 316 FDFFGYHI 323


>02_02_0270 +
           8431503-8431830,8431961-8432149,8434288-8434412,
           8434527-8434703,8434798-8434871,8434978-8435713
          Length = 542

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 282 LMCPRYNTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTF 401
           L+ PRY   + +V+I     T+ L ++   ATY      F
Sbjct: 93  LLVPRYTNTLSMVYIIQGRGTMGLTFLGCPATYQQQFQQF 132


>03_06_0563 -
           34738732-34738890,34738965-34739009,34739154-34739201,
           34739291-34739386,34739467-34739534,34739633-34739690,
           34739783-34739869,34740004-34740051,34740360-34740416,
           34740525-34740783,34740877-34741102,34741168-34741275,
           34741885-34741987
          Length = 453

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 467 FGGIVDFFHLFG--ICRYSTSTVPGFKNKRGRKHYLSLSV 580
           FGG   +  +FG  IC Y+T  V     K G+ H +   V
Sbjct: 139 FGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDV 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,171,673
Number of Sequences: 37544
Number of extensions: 425725
Number of successful extensions: 814
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)