Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_A11
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49887-4|CAA90056.2| 213|Caenorhabditis elegans Hypothetical pr... 225 3e-59
AF081125-1|AAC31954.1| 213|Caenorhabditis elegans ER lumen prot... 225 3e-59
U20861-10|AAA62292.1| 213|Caenorhabditis elegans Hypothetical p... 214 8e-56
AF036693-1|AAK29785.1| 391|Caenorhabditis elegans Hypothetical ... 38 0.010
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas... 29 4.5
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas... 29 4.5
>Z49887-4|CAA90056.2| 213|Caenorhabditis elegans Hypothetical
protein F09B9.3 protein.
Length = 213
Score = 225 bits (551), Expect = 3e-59
Identities = 96/146 (65%), Positives = 127/146 (86%)
Frame = +3
Query: 297 YNTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEV 476
YNT MK+ ++ S+ T+YLM+ KFKATYD N+D+FRIEFL+IP+ ILALLINHEF +EV
Sbjct: 59 YNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEV 118
Query: 477 LWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHYEL 656
+WTFSIYLE+VAI+PQLF++S+T AE+IT+HYLFAL SYR LY+LNWVYRY ES ++
Sbjct: 119 MWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYTESFFDP 178
Query: 657 IAIISGVVQTILYCDFFYLYITKVLK 734
I++++G+VQT+LY DFFYLYIT+V++
Sbjct: 179 ISVVAGIVQTVLYADFFYLYITRVIQ 204
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +2
Query: 122 MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVS 292
MN+FR D WKSRSC GISG+SQ+LF++V+ TRYLDL T S
Sbjct: 1 MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFS 57
>AF081125-1|AAC31954.1| 213|Caenorhabditis elegans ER lumen protein
retaining receptor protein.
Length = 213
Score = 225 bits (551), Expect = 3e-59
Identities = 96/146 (65%), Positives = 127/146 (86%)
Frame = +3
Query: 297 YNTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEV 476
YNT MK+ ++ S+ T+YLM+ KFKATYD N+D+FRIEFL+IP+ ILALLINHEF +EV
Sbjct: 59 YNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEV 118
Query: 477 LWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHYEL 656
+WTFSIYLE+VAI+PQLF++S+T AE+IT+HYLFAL SYR LY+LNWVYRY ES ++
Sbjct: 119 MWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYTESFFDP 178
Query: 657 IAIISGVVQTILYCDFFYLYITKVLK 734
I++++G+VQT+LY DFFYLYIT+V++
Sbjct: 179 ISVVAGIVQTVLYADFFYLYITRVIQ 204
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +2
Query: 122 MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVS 292
MN+FR D WKSRSC GISG+SQ+LF++V+ TRYLDL T S
Sbjct: 1 MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFS 57
>U20861-10|AAA62292.1| 213|Caenorhabditis elegans Hypothetical
protein C28H8.4 protein.
Length = 213
Score = 214 bits (522), Expect = 8e-56
Identities = 92/154 (59%), Positives = 123/154 (79%), Gaps = 1/154 (0%)
Frame = +3
Query: 297 YNTVMKLVFIFTSYATIYLMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEV 476
YNT MK+ F+ +YAT+YLM+ KF++TY DTFR+E L++P ILALLINH+F E+
Sbjct: 59 YNTTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLINHDFAPFEL 118
Query: 477 LWTFSIYLESVAILPQLFLVSKTREAESITSHYLFALXSYRALYLLNWVYRYVVESHYEL 656
LWTFSIYLE+VAILPQLFL+ T AE IT+HYLFAL SYRALY+ NW+YRY E +++
Sbjct: 119 LWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTEDYFDP 178
Query: 657 IAIISGVVQTILYCDFFYLYITKVLK-GKXLQLP 755
I +++G+VQT+LY DFFYLY+T+V++ K ++LP
Sbjct: 179 IVVVAGIVQTVLYADFFYLYVTRVVQTRKGMELP 212
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +2
Query: 122 MNIFRLLGDXXXXXXXXXXXXXXWKSRSCAGISGKSQILFSVVYTTRYLDLLTTHVS 292
MNIFR+ D WKSRSC+GIS +SQILF++V+T RYLDL +T++S
Sbjct: 1 MNIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYIS 57
>AF036693-1|AAK29785.1| 391|Caenorhabditis elegans Hypothetical
protein C49A9.7 protein.
Length = 391
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/79 (25%), Positives = 43/79 (54%)
Frame = +3
Query: 351 LMYVKFKATYDHNHDTFRIEFLLIPTFILALLINHEFTVLEVLWTFSIYLESVAILPQLF 530
L+ F++ YD + T + F+ PT + +++ F +L+T +I+L + ++
Sbjct: 27 LINCTFQSFYDQMYQTHGVYFIFEPTPFVHPIVSQIF--YGILFTLTIFLALMGNFTVMW 84
Query: 531 LVSKTREAESITSHYLFAL 587
++ R+ S+T++YLF L
Sbjct: 85 IILYHRQMRSVTNYYLFNL 103
>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoforma protein.
Length = 1045
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -3
Query: 365 LDIHQINSCIGGKDEHQLHDSVIXGTHEL*VDPNNVSCIPLKTESETFL 219
+ +HQINS GK EH + S+ GT L ++ + + KTES FL
Sbjct: 532 IHLHQINSKQKGKGEHSVR-SLQSGTSTL----SSRTTVSFKTESRNFL 575
>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
protein 7, isoformb protein.
Length = 1111
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -3
Query: 365 LDIHQINSCIGGKDEHQLHDSVIXGTHEL*VDPNNVSCIPLKTESETFL 219
+ +HQINS GK EH + S+ GT L ++ + + KTES FL
Sbjct: 532 IHLHQINSKQKGKGEHSVR-SLQSGTSTL----SSRTTVSFKTESRNFL 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,211,699
Number of Sequences: 27780
Number of extensions: 410387
Number of successful extensions: 908
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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