Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A05
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0470 - 10700092-10700505                                        134   7e-32
10_08_0951 - 21769342-21769752                                        134   9e-32
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376...    31   0.99 
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210...    31   1.3  
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164...    28   9.2  
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148...    28   9.2  

>02_02_0470 - 10700092-10700505
          Length = 137

 Score =  134 bits (325), Expect = 7e-32
 Identities = 61/126 (48%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
 Frame = +2

Query: 125 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 304
           ++L GRYAGRKA++V+ ++EGT D+PYGH  VAG+ +YP+KV ++    K  K+S++K F
Sbjct: 12  ILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCF 71

Query: 305 VKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRFEERYKSGKNKWF 475
           +K+VN+ H+MPTRYT+D  F+  ++      A R KK+      + R EER+K+GKN+WF
Sbjct: 72  LKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFKTGKNRWF 131

Query: 476 FQKLRF 493
           F KLRF
Sbjct: 132 FTKLRF 137


>10_08_0951 - 21769342-21769752
          Length = 136

 Score =  134 bits (324), Expect = 9e-32
 Identities = 58/125 (46%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
 Frame = +2

Query: 125 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 304
           ++L GR+AGRKA++V+ ++EGT D+PYGH  VAG+ +YP+KV ++    K  K+S++K F
Sbjct: 12  ILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCF 71

Query: 305 VKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFEERYKSGKNKWFF 478
           +K+VN+ HLMPTRYT+D   ++ +A       + KK+    + + R E+R+K+GKN+WFF
Sbjct: 72  LKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFF 131

Query: 479 QKLRF 493
            KLRF
Sbjct: 132 TKLRF 136


>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
            3764013-3764961,3766967-3767064,3768144-3768284,
            3768758-3768874,3768924-3769013,3769014-3771818
          Length = 1632

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +1

Query: 127  GPKWPVRGSQGYRSQELRRRYLRQAIRACLRRWYRQ--VPPE-SAQEDGKE*N-PQEVQD 294
            G KW +   +  RS E +R ++ +AIR  +R + ++  +PP      DG E N  +EV D
Sbjct: 1000 GNKWDMCTKEHSRSNEFKRLFVPEAIRKLIRPYDKELSIPPVFPGVHDGNEVNSKEEVND 1059

Query: 295  KA 300
             +
Sbjct: 1060 SS 1061


>08_02_1046 -
           23919990-23920183,23920251-23920479,23920624-23921057,
           23921426-23921567,23922163-23922255,23923132-23923245,
           23924181-23924266,23924458-23924506,23924717-23924783,
           23925550-23925665,23925698-23925821,23926465-23926553,
           23926810-23927061
          Length = 662

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 142 VRGSQGYRSQELRRRYLRQAIRACLRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRQGC 315
           V G+ G +   ++RR+L QA+ +  R   R  PP +A   E  +   P  +++ AF +  
Sbjct: 24  VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEEYY 83

Query: 316 KLQSL 330
           K Q +
Sbjct: 84  KEQRI 88


>09_01_0103 -
           1628763-1628879,1641827-1642921,1645126-1645476,
           1645567-1645734
          Length = 576

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 417 RSFLRFAGSFRSFALNFSKLKSTV*RV 337
           RSFL  AG +R F  NFSK+  ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479


>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
            31615047-31616835,31617136-31617163,31617343-31617794
          Length = 1715

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +2

Query: 227  IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 391
            I  Y R++   M   ++ +  K+K F   +NY+H    R T  ++     E  S KDLK
Sbjct: 919  IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,470,046
Number of Sequences: 37544
Number of extensions: 335271
Number of successful extensions: 1237
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)