Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A03
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   212   5e-55
BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   212   5e-55
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   212   5e-55
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   212   5e-55
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro...    30   4.7  
AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p pro...    30   4.7  
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA...    30   4.7  

>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  212 bits (518), Expect = 5e-55
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = +1

Query: 415 ITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 594
           I+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+I
Sbjct: 114 ISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173

Query: 595 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 774
           KF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233



 Score =  206 bits (503), Expect = 3e-53
 Identities = 94/113 (83%), Positives = 102/113 (90%)
 Frame = +3

Query: 75  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60

Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 413
           V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR
Sbjct: 61  VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHR 113



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 773 KAYXSLPRGKGIRLTIAEERDXRIXA 850
           K Y SLP+GKG++L+IAEERD R+ A
Sbjct: 233 KPYISLPKGKGVKLSIAEERDKRLAA 258


>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  212 bits (518), Expect = 5e-55
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = +1

Query: 415 ITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 594
           I+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+I
Sbjct: 114 ISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173

Query: 595 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 774
           KF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233



 Score =  212 bits (517), Expect = 6e-55
 Identities = 96/113 (84%), Positives = 104/113 (92%)
 Frame = +3

Query: 75  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 413
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHR 113



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 773 KAYXSLPRGKGIRLTIAEERDXRIXA 850
           K Y SLP+GKG++L+IAEERD R+ A
Sbjct: 233 KPYISLPKGKGVKLSIAEERDKRLAA 258


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  212 bits (518), Expect = 5e-55
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = +1

Query: 415 ITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 594
           I+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+I
Sbjct: 114 ISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173

Query: 595 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 774
           KF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233



 Score =  212 bits (517), Expect = 6e-55
 Identities = 96/113 (84%), Positives = 104/113 (92%)
 Frame = +3

Query: 75  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 413
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHR 113



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 773 KAYXSLPRGKGIRLTIAEERDXRIXA 850
           K Y SLP+GKG++L+IAEERD R+ A
Sbjct: 233 KPYISLPKGKGVKLSIAEERDKRLAA 258


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  212 bits (518), Expect = 5e-55
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = +1

Query: 415 ITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFI 594
           I+ EEAKYKLCKVK+   G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+I
Sbjct: 114 ISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYI 173

Query: 595 KFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTK 774
           KF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K
Sbjct: 174 KFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK 233



 Score =  212 bits (517), Expect = 6e-55
 Identities = 96/113 (84%), Positives = 104/113 (92%)
 Frame = +3

Query: 75  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHR 413
           V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHR 113



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +2

Query: 773 KAYXSLPRGKGIRLTIAEERDXRIXA 850
           K Y SLP+GKG++L+IAEERD R+ A
Sbjct: 233 KPYISLPKGKGVKLSIAEERDKRLAA 258


>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
           protein.
          Length = 1098

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 110 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 286
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611


>AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p
           protein.
          Length = 561

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 110 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 286
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 18  KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74


>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
           protein.
          Length = 1098

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 110 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 286
           K  QS+D  +    +     NR+ ++ + L+ G+  E+     FDRK SP   ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,829,337
Number of Sequences: 53049
Number of extensions: 951894
Number of successful extensions: 3010
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3007
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)