Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_A02
         (964 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens ...    32   2.7  
AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protei...    31   8.3  

>AK025837-1|BAB15254.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22184 fis, clone HRC00983. ).
          Length = 616

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +3

Query: 537 SAPPXQHHKNRPSSPQX---AKPXPDYKXPXAXSPLXSPPRXXPPGSXP 674
           +APP Q   + P+SP     A P P    P A  PL  PP   PP S P
Sbjct: 192 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP--SPPASPP 238


>AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protein
           protein.
          Length = 503

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 5/104 (4%)
 Frame = +3

Query: 474 KRPXXRPAXVXXPRCWRXXIXSAPPXQHHKNRPSSPQXAKPXPDYKXPXAXS---PLXSP 644
           K P   P     P   R  +   PP  +    PS+P+ + P   +  P   S   P   P
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAPHRPHLRPPPPSRPGPPPLP 322

Query: 645 PRXXPPGSXPXRXXXXXXXXXXXXXRASXGRXSPLXPP--DXPP 770
           P        P                 S GR  PL PP  + PP
Sbjct: 323 PSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPP 366


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,714,037
Number of Sequences: 237096
Number of extensions: 1386918
Number of successful extensions: 3699
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12769697060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)