Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P24
         (895 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    93   9e-18
UniRef50_Q2QNH5 Cluster: Putative uncharacterized protein; n=2; ...    38   0.46 
UniRef50_Q55898 Cluster: Polyphosphate kinase; n=21; Bacteria|Re...    36   1.8  
UniRef50_A0H122 Cluster: Putative uncharacterized protein; n=2; ...    35   2.4  
UniRef50_Q3JRZ2 Cluster: Cyd operon protein YbgT, putative; n=9;...    34   5.6  
UniRef50_A2R6D0 Cluster: Contig An15c0240, complete genome; n=4;...    33   9.8  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 93.1 bits (221), Expect = 9e-18
 Identities = 68/176 (38%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
 Frame = +3

Query: 132 MAAKFVV-LFACIALAQGAMVRRDAP---DFFKDIEHHTKEFHKTLX----TTV*LAHQV 287
           MAAKFVV L AC+AL+  AMVRRDAP   + F+++E H KEF KT      + V   +  
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQ 60

Query: 288 KGRTGLQQGLEGRLRVRAATAQRLRQESPGXRSETRTARPRRLWNXXXXXXXXXXXXXXX 467
                L+ G +  L+  +A +  L+        + + A  +   N               
Sbjct: 61  DFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAHPD- 119

Query: 468 XXLXVEKNAXXLREKLQAAVQNTVQESQKLAKKVSSXVXEXNETLAPKIXXXYXXF 635
               VEK A   ++KLQAAVQ TVQESQKLAK+V+S + E N+ LAPKI   Y  F
Sbjct: 120 ----VEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDF 171



 Score = 56.8 bits (131), Expect = 7e-07
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +1

Query: 262 QQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSL 372
           +QFNSL  SK+ QDF+KA KDGS+SVLQQL+AF+ SL
Sbjct: 48  EQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSL 84



 Score = 54.4 bits (125), Expect = 4e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = +2

Query: 380 ALGDANGKAKEALEQSRQNIERTAEELRK 466
           A+ DANGKAKEALEQ+RQN+E+TAEELRK
Sbjct: 87  AISDANGKAKEALEQARQNVEKTAEELRK 115


>UniRef50_Q2QNH5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 180

 Score = 37.5 bits (83), Expect = 0.46
 Identities = 25/53 (47%), Positives = 29/53 (54%)
 Frame = -3

Query: 467 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 309
           P  APR  +RCSAS    PP P R  LR LP    A+ L+   TD E  F+AL
Sbjct: 51  PAQAPR-LSRCSASRSGAPPHPRRDTLRILPSCRGARLLAIAETDVE--FEAL 100


>UniRef50_Q55898 Cluster: Polyphosphate kinase; n=21; Bacteria|Rep:
           Polyphosphate kinase - Synechocystis sp. (strain PCC
           6803)
          Length = 728

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 24/90 (26%), Positives = 39/90 (43%)
 Frame = -3

Query: 371 RLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCX*SLMELLGVVFDVLEEVGSVAS 192
           R++AK  S   T    +  A  ++    DL+    CC    +E +     V+  +G +  
Sbjct: 565 RIVAKMNSLVDTQIIRALYAASQAGVQIDLIVRGICCLRPGVENVSENIRVISVIGRLLE 624

Query: 191 HHRSLGQSDAGEENYELGGHDVLSRD*VRR 102
           H R     + GEE   +G  D +SR+  RR
Sbjct: 625 HSRIFYFHNGGEEEIYIGSADWMSRNLTRR 654


>UniRef50_A0H122 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Chloroflexus aggregans DSM 9485
          Length = 222

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 467 PCGAPRP-CARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 291
           PC A  P CAR  A    +   P  +R  A P    A   SC   D+EP  +A L SCA 
Sbjct: 84  PCRAALPSCARADAEPPCRAALPSCARADAEP-PCRAALPSCARADAEPPCRAALPSCAR 142

Query: 290 FD 285
            D
Sbjct: 143 AD 144



 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 467 PCGAPRP-CARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 291
           PC A  P CAR  A    +   P  +R  A P    A   SC   D+EP  +A L SCA 
Sbjct: 100 PCRAALPSCARADAEPPCRAALPSCARADAEP-PCRAALPSCARADAEPPCRAALPSCAR 158

Query: 290 FD 285
            D
Sbjct: 159 AD 160



 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 467 PCGAPRP-CARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 291
           PC A  P CAR  A    +   P  +R  A P    A   SC   D+EP  +A L SCA 
Sbjct: 116 PCRAALPSCARADAEPPCRAALPSCARADAEP-PCRAALPSCARADAEPPCRAALPSCAR 174

Query: 290 FD 285
            D
Sbjct: 175 AD 176



 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 467 PCGAPRP-CARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 291
           PC A  P CAR  A    +   P  +R  A P    A   SC   D+EP  +A L SCA 
Sbjct: 132 PCRAALPSCARADAEPPCRAALPSCARADAEP-PCRAALPSCARADAEPPCRAALPSCAR 190

Query: 290 FD 285
            D
Sbjct: 191 AD 192



 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 467 PCGAPRP-CARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 291
           PC A  P CAR  A    +   P  +R  A P    A   SC   D+EP  +A L SCA 
Sbjct: 148 PCRAALPSCARADAEPPCRAALPSCARADAEP-PCRAALPSCARADAEPPCRAALPSCAR 206

Query: 290 FD 285
            D
Sbjct: 207 AD 208


>UniRef50_Q3JRZ2 Cluster: Cyd operon protein YbgT, putative; n=9;
           Burkholderia|Rep: Cyd operon protein YbgT, putative -
           Burkholderia pseudomallei (strain 1710b)
          Length = 526

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = -3

Query: 452 RPCARCSASTVPKPPWPCRSRLRALP 375
           RP  RCS ST P+PP P RSR R +P
Sbjct: 26  RPTKRCSCSTRPRPPRPKRSR-RPIP 50


>UniRef50_A2R6D0 Cluster: Contig An15c0240, complete genome; n=4;
           Trichocomaceae|Rep: Contig An15c0240, complete genome -
           Aspergillus niger
          Length = 630

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 26/78 (33%), Positives = 37/78 (47%)
 Frame = +3

Query: 30  LCGIPLMX*IVGHTPSVLQSGSASPPHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPD 209
           +CGI  +  I+G  PSVLQ+G+A   H+       A  F++    +AL  G      AP 
Sbjct: 193 ICGIAHIIQIIGAIPSVLQAGTA---HA-------APPFIIGLLLLALGAGIFKPNIAPT 242

Query: 210 FFKDIEHHTKEFHKTLXT 263
              D   H K++ K L T
Sbjct: 243 VL-DQYRHQKQYTKVLKT 259


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,369,857
Number of Sequences: 1657284
Number of extensions: 9020775
Number of successful extensions: 36203
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34472
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)