Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P24
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-8|AAC68800.1|  488|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AF099919-8|AAC68800.1|  488|Caenorhabditis elegans Hypothetical
           protein F40G9.5 protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +2

Query: 20  PSPIMWNSLNXLNCWTHSLCVAVRFCISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATR 199
           P   +W  L  LN WT+++C   R  ISSA  L     G    S ++L   G  S    R
Sbjct: 5   PDRNLWIGL--LN-WTYAVCGPPRVVISSATGLMLFKRGFFEESLIKLFLGGEHSKLGGR 61

Query: 200 RSR 208
           R R
Sbjct: 62  RLR 64


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 473 GGPCGAPRPCARCSASTVPKPP 408
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,534,524
Number of Sequences: 27780
Number of extensions: 205890
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)