Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P23
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 400  PGDQKDDWICDCRPANLYH 456
            PGDQ +  +   RPA  YH
Sbjct: 950  PGDQTEAGVFTLRPATTYH 968


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 495 SLSKSWPAFVCSWVI 451
           +L+K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 495 SLSKSWPAFVCSWVI 451
           +L+K WP FV  W +
Sbjct: 104 NLAKRWPKFVKDWCV 118


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 496  PCEVGQYLXLPQN 534
            PCE GQY+  P N
Sbjct: 1102 PCEPGQYVPDPHN 1114


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 287 ELFCAIDVTNNAHVRNIIFK*HILNSIT 204
           + F ++   +N  V+N  +K HI+ SIT
Sbjct: 555 QAFSSLKELSNHMVKNSHYKEHIMRSIT 582


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,093
Number of Sequences: 336
Number of extensions: 3581
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)