Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_P23
(933 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.32
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.57
03_01_0515 - 3864796-3865425 31 1.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.7
06_01_0486 - 3455030-3455770 30 2.3
12_02_1174 - 26696869-26698191 29 7.0
08_01_0059 - 394001-394708 29 7.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.32
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 684 PXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
P PPP PP P P P P PP PP PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.57
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
P P PPP P P P P PP PP P PP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP 603
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/73 (24%), Positives = 18/73 (24%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPPXX 857
P P PPP P P P P PP PP P PP
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
Query: 858 XXXXXXXXXXPXP 896
P P
Sbjct: 624 PPPLPNHSVLPPP 636
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 696 PPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
PPP PP P P P P PP PP PP
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPP 637
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +3
Query: 696 PPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPPXXXXXXXX 875
PPP PP P P P P PP PP PP
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNK 661
Query: 876 XXXXPXP 896
P P
Sbjct: 662 FPAPPPP 668
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +3
Query: 696 PPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPPXXXXXXXX 875
PPP PP P P P PP PP P PP
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKF 662
Query: 876 XXXXPXP 896
P P
Sbjct: 663 PAPPPPP 669
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/73 (23%), Positives = 17/73 (23%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPPXX 857
P P PPP P P P P PP PP PP
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPP 624
Query: 858 XXXXXXXXXXPXP 896
P P
Sbjct: 625 PPLPNHSVLPPPP 637
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
P P P PP P P P P PP PP P PP
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/88 (25%), Positives = 22/88 (25%), Gaps = 4/88 (4%)
Frame = +3
Query: 678 PXPXXXPP-PXXXPPXXXXXXXXXPXPXXXXPXXXXXXX---PXXPPXPPXXXPXXXXXX 845
P P PP P PP P P P P PP PP P
Sbjct: 1124 PLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPP 1183
Query: 846 PPXXXXXXXXXXXXPXPXXXXXXXXPXP 929
PP P P P P
Sbjct: 1184 PPPPLPSGPPPQPAPPPLPIQPPPIPPP 1211
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXX-PPXPPXXXPXXXXXXPP 851
P P PP PP P P P P PP PP P PP
Sbjct: 84 PRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPP 142
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXP 827
P PPP PP P P P PP PP P
Sbjct: 149 PPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRP 198
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 699 PPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
PP PP P P P PP PP P PP
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPP 173
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
P P PPP P P P P P PP P PP
Sbjct: 12 PPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPP 69
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +3
Query: 678 PXPXXXPPPXXXPPXXXXXXXXXPXPXXXXPXXXXXXXPXXPPXPPXXXPXXXXXXPP 851
P P P PP P P P P PP P P PP
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,977,283
Number of Sequences: 37544
Number of extensions: 402783
Number of successful extensions: 1385
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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