Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_P22
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.031
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.38
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.67
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.88
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/68 (27%), Positives = 19/68 (27%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P P P P PP P PP P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 805 PPXPPPXP 828
P P P P
Sbjct: 475 APPPAPAP 482
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/87 (24%), Positives = 21/87 (24%)
Frame = +3
Query: 546 PPDXPHQNXXXXXTXXXXTXPXXSPXXPXXXPSXXPXXXXXXXXXXXPXXPXXXXXPPXX 725
P P N T T P P P P P P P PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL- 459
Query: 726 XPPXLXXXXPPXXXXXPXPXPXXXXXP 806
P PP P P P P
Sbjct: 460 --PAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +1
Query: 685 PPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPP---XXXPPPXPPPXP 828
PP P P P P P P P PP PPP PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.054
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 718 PXXPPPXXPXXPPXXXXXPXXPXPPXXXPPPXPPPXP 828
P PPP P P P P PP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 32.3 bits (70), Expect = 0.094
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +2
Query: 695 PXXXXXPXPXXPPXPXXXXPPXXXXXPXPXXXPPXXPPXXPPPXXXXXXXXXXPPP 862
P P P PP P PP P P PP PP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 728 PPXPXXXXP-PXXXXXPXPXXXPPXXPPXXPPPXXXXXXXXXXPPPP 865
PP P P P P P P P PPP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.67
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 728 PPXPXXXXPPXXXXXPXPXXXPPXXPPXXPPPXXXXXXXXXXPPPP 865
PP P P P P P PPP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.1 bits (62), Expect = 0.88
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 713 PXPXXPPXPXXXXPPXXXXXPXPXXXPPXXPPXXPPPXXXXXXXXXXPPPP 865
P P P P P P P PP PPP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGP--PPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +3
Query: 714 PPXXXPPXLXXXXPPXXXXXPXPXPXXXXXPPXXPPXXXPXXXXXPP 854
PP P + P P P P PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 753 PPXXXXXPXPXPXXXXXPPXXPPXXXPXXXXXPPXXXXXXXXPP 884
PP P P P PP P P PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.031
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 827 GXGGGXGGGXXXGGXGXXGXXXXXGGXXGXXGGGXXGXG 711
G GGG GG G G G GG G GG G G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 827 GXGGGXGGGXXXGGXGXXGXXXXXGGXXGXXGGGXXGXG 711
G GG GGG G G GG G GG G
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 827 GXGGGXGG-GXXXGGXGXXGXXXXXGGXXGXXGGGXXG 717
G GG GG G GG G G GG G GGG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFG-----GGRGGARGGGRGG 42
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +2
Query: 668 PXXXXXPXXPXXXXXPXPXXPPXPXXXXPPXXXXXPXPXXXPPXXPPXXPPPXXXXXXXX 847
P P P P PP P P P P PP P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP-IPSSLPPPAQPAAPVK 182
Query: 848 XXPPPP 865
P P
Sbjct: 183 SPPSAP 188
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P + PP P P PP PP P P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP-----PAQPAAPVKSP 184
Query: 805 PPXP 816
P P
Sbjct: 185 PSAP 188
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P PP P PP P P P P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP--PVPPPSTA 1216
Query: 805 PPXPPP 822
PP P P
Sbjct: 1217 PPVPTP 1222
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P P PP P P P P P P P P
Sbjct: 1131 PPVPVPSGAPP-VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 805 PPXPP 819
P PP
Sbjct: 1190 PVPPP 1194
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P P P P P P PP P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVP 1208
Query: 805 PPXPP 819
P PP
Sbjct: 1209 PVPPP 1213
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +1
Query: 685 PPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXPPPXPP 819
PP P PP P P P P P PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/72 (26%), Positives = 19/72 (26%), Gaps = 4/72 (5%)
Frame = +1
Query: 625 PPXXXPXXXPXXTXXXXXXXPPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXP 804
PP P P PP P P P P P P P P
Sbjct: 1083 PPVPAPSGIPP-VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 805 PPXP----PPXP 828
P P PP P
Sbjct: 1142 VPKPSVAAPPVP 1153
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = +2
Query: 662 PXPXXXXXPXXPXXXXXPXPXXPPXPXXXXPPXXXXXPXPXXX-PPXXPPXXPPPXXXXX 838
P P P P P P P PP P P PP PP PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPV--PAPSSGIPPV----PKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 839 XXXXXPPPP 865
PPP
Sbjct: 1205 VGVPPVPPP 1213
Score = 25.8 bits (54), Expect = 8.2
Identities = 30/120 (25%), Positives = 32/120 (26%), Gaps = 2/120 (1%)
Frame = +2
Query: 512 GRXA-GVXPXAPPPXXXSPKXTXXXXVXXXXXXXXXPXXPPXXXLXXXLXX-PXPXXXXX 685
GR A G P APP P + PP L + P
Sbjct: 955 GRKASGPRPAAPPSI---PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARV 1011
Query: 686 PXXPXXXXXPXPXXPPXPXXXXPPXXXXXPXPXXXPPXXPPXXPPPXXXXXXXXXXPPPP 865
P P P P P PP P P PP P PP PPP
Sbjct: 1012 PPVPKLSSKAPPV--PLPSADAPPI----PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +1
Query: 712 PXPXXPPPXXPXXPPXXXXXPXXPXPPXXXPPPXPPPXP 828
P P PP P P PP PP P P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKP 999
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 727 PPPXXPXXPPXXXXXPXXPXPPXXXPPPXP 816
PPP PP P PP PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.88
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 685 PPXXXXXXXPXPXXPPPXXPXXPPXXXXXPXXPXPPXXXPPPXPPPXP 828
PP P P P P PP P P PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +1
Query: 718 PXXPPPXXPXXP-PXXXXXPXXPXPPXXXPPPX-PPPXP 828
P PP P P P P PP PPP PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +2
Query: 686 PXXPXXXXXPXPXXPPXPXXXXPPXXXXXPXPXXXP-PXXPPXXPPPXXXXXXXXXXPPP 862
P P P P P PP P P P P PP PPP P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 791 PPXXPPXXPPPXXXXXXXXXXPPPP 865
PP PP PPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 772 PXXPXPPXXXPPPXPPPXP 828
P P PP PP PPP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 730 PPXXPXXPPXXXXXPXXPXPPXXXPPPXPP 819
PP P PP P PP PPP PP
Sbjct: 5 PPGNPPPPPP----PPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 773 PXPXXXPPXXPPXXPPP 823
P P PP PP PPP
Sbjct: 14 PPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 791 PPXXPPXXPPPXXXXXXXXXXPPPP 865
P PP PPP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.88
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 712 PXPXXPPPXXPXXPPXXXXXPXXPXPPXXXPPPXPPPXP 828
P PP P P P P PPP PPP P
Sbjct: 161 PNSMVSPP--PSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 712 PXPXXPPPXXPXXPPXXXXXPXXPXP 789
P P PPP P PP P P
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 802 PPPXPPPXP 828
PPP PPP P
Sbjct: 945 PPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 790 PXXXPPPXPPP 822
P PPP PPP
Sbjct: 942 PAFPPPPPPPP 952
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 827 GXGGGXGGGXXXGGXGXXGXXXXXGGXXGXXGGGXXG 717
G GG GG G G G G G GG G
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,409,266
Number of Sequences: 5004
Number of extensions: 17759
Number of successful extensions: 261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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