Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_P19
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 127 2e-30
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 127 2e-30
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 87 3e-18
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 54 4e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 48 1e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 2e-05
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 40 6e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 39 9e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 9e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 38 0.002
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 36 0.006
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.056
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.074
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.098
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 32 0.13
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 32 0.13
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 32 0.13
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.40
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.92
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.2
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 28 2.1
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 6.5
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 127 bits (307), Expect = 2e-30
Identities = 69/130 (53%), Positives = 82/130 (63%)
Frame = +2
Query: 125 MVXFTVDXIRGXXXKKRXIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 304
MV FT + +R K +RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 305 KXEXDRCIXXKSTAISMFFELXEXXXVFITNPDXXXXXXXGFLIXXIDSPGPXDLSSEXX 484
E +R + KSTAIS+F E+ + + P FL+ IDSPG D SSE
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDMKDMKEP----ADGTDFLVNLIDSPGHVDFSSEVT 116
Query: 485 AALRXXDGXL 514
AALR DG L
Sbjct: 117 AALRVTDGAL 126
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 127 bits (307), Expect = 2e-30
Identities = 69/130 (53%), Positives = 82/130 (63%)
Frame = +2
Query: 125 MVXFTVDXIRGXXXKKRXIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 304
MV FT + +R K +RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 305 KXEXDRCIXXKSTAISMFFELXEXXXVFITNPDXXXXXXXGFLIXXIDSPGPXDLSSEXX 484
E +R + KSTAIS+F E+ + + P FL+ IDSPG D SSE
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDMKDMKEP----ADGTDFLVNLIDSPGHVDFSSEVT 116
Query: 485 AALRXXDGXL 514
AALR DG L
Sbjct: 117 AALRVTDGAL 126
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 87.0 bits (206), Expect = 3e-18
Identities = 49/110 (44%), Positives = 65/110 (59%)
Frame = +2
Query: 179 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKXEXDRCIXXKSTAISMF 358
IRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+ E R I KS+AIS+F
Sbjct: 19 IRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLF 78
Query: 359 FELXEXXXVFITNPDXXXXXXXGFLIXXIDSPGPXDLSSEXXAALRXXDG 508
F+ + + + +LI IDSPG D SSE +A R DG
Sbjct: 79 FK--------VISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDG 120
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 53.6 bits (123), Expect = 4e-08
Identities = 35/128 (27%), Positives = 44/128 (34%), Gaps = 2/128 (1%)
Frame = +3
Query: 534 SGVCXPPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIX--PXRXPP 707
SG P+ + P P P +PP P P + P P P P + P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPV--PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 708 LXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPX 887
P P + G P P P P P P P +P P+ P P+ P
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT-PSAGLPPVPVPTA 1234
Query: 888 XXPPXPPP 911
PP P P
Sbjct: 1235 KAPPVPAP 1242
Score = 48.4 bits (110), Expect = 1e-06
Identities = 34/126 (26%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Frame = +3
Query: 540 VCXPPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIX--PXRXPPLX 713
V PP P P +PP P P + P P P P + P P
Sbjct: 1099 VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Query: 714 XPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXX 893
P P P PP P P P P +P P P P+ PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK-PSVGVPPV-PPPSTA 1216
Query: 894 PPXPPP 911
PP P P
Sbjct: 1217 PPVPTP 1222
Score = 46.0 bits (104), Expect = 7e-06
Identities = 29/111 (26%), Positives = 34/111 (30%), Gaps = 1/111 (0%)
Frame = +3
Query: 582 PXXXPIXSPPHPGPXXS*APTXTXDX-LXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXP 758
P P PP P P + P + P P+P P P P P G P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 759 XPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPPP 911
P P P + P P P+ P PP PPP
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 44.8 bits (101), Expect = 2e-05
Identities = 34/123 (27%), Positives = 38/123 (30%), Gaps = 2/123 (1%)
Frame = +3
Query: 549 PPQTVLXPXPXPXXX-PIXSPPHPGPXXS*APTXTXDXLXPXPSPP-IXPXRXPPLXXPX 722
P T P P P PP P P P P+P I P P + P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 723 PPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPX 902
P S P P P P P P P +P P P P+ P PP
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK-PSVAAPPVPAPSGA-PPV 1161
Query: 903 PPP 911
P P
Sbjct: 1162 PKP 1164
Score = 42.3 bits (95), Expect = 9e-05
Identities = 34/126 (26%), Positives = 40/126 (31%), Gaps = 2/126 (1%)
Frame = +3
Query: 534 SGVCXPPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDX-LXPXPSPPIX-PXRXPP 707
SG P+ + P P P +PP P P + P + P P P P PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPA--PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 708 LXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPX 887
P P S G P P P P P P P + PP P P
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP-TAKAPPVPAPSSEAPSVSTPR 1253
Query: 888 XXPPXP 905
P P
Sbjct: 1254 SSVPSP 1259
Score = 39.1 bits (87), Expect = 9e-04
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +3
Query: 666 PXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSP---X 836
P P P P P P P S G P P P P P P +P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 837 PPSXPXXXXXPLXXPPXXXPPXPPP 911
P P P+ P PP P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 36.7 bits (81), Expect = 0.005
Identities = 33/125 (26%), Positives = 35/125 (28%), Gaps = 4/125 (3%)
Frame = +3
Query: 549 PPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPX-- 722
PP V P P P P T L P P + PP+ P
Sbjct: 971 PPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSAD 1030
Query: 723 -PP-PXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXP 896
PP P P P P P P P P P P S P PP P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV--PAPSSEIPSIPAPSGAPPVPAP 1088
Query: 897 PXPPP 911
PP
Sbjct: 1089 SGIPP 1093
Score = 36.3 bits (80), Expect = 0.006
Identities = 33/120 (27%), Positives = 37/120 (30%)
Frame = +3
Query: 552 PQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPP 731
P P P P +PP P P S P P PP+ P P P
Sbjct: 1027 PSADAPPIPVPS----TAPPVPIP-TSTPPVPKSSSGAPSAPPPVP---APSSEIPSIPA 1078
Query: 732 XSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPPP 911
S PP P P P P P P + PP P+ P PP P P
Sbjct: 1079 PSGAPP-VPAPSGIPPVPKPSVAAPPVPKPSVA-VPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 33.9 bits (74), Expect = 0.032
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 3/101 (2%)
Frame = +3
Query: 552 PQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIX--PXRXPPLXXPXP 725
P P P P PP P P P P P P + P P P P
Sbjct: 1164 PSVAAPPVPAPSSG---IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Query: 726 PPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXS-PXPPS 845
P + PP P P P P S P P S
Sbjct: 1221 TPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHS 1261
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +2
Query: 143 DXIRGXXXKKRXIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKXEXDR 322
+ +RG + +RN +VIAH+DHGKSTL+D ++ G+I +F D + E R
Sbjct: 48 EVVRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRR 104
Query: 323 CIXXKSTAISMFF 361
I K+ SM +
Sbjct: 105 GITVKAQTCSMIY 117
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.4 bits (100), Expect = 2e-05
Identities = 31/102 (30%), Positives = 36/102 (35%), Gaps = 3/102 (2%)
Frame = +3
Query: 555 QTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPP- 731
+ V P P P S P P + + T T P P+PP P PP P PP
Sbjct: 383 RAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP----PVPTPPSLPPSAPPSLPPSAPPS 438
Query: 732 -XSXGPPRXPXPPXXPXXPXXXXXXP-XXXXPXXSPXPPSXP 851
P P PP P P P P +P PP P
Sbjct: 439 LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 35.5 bits (78), Expect = 0.011
Identities = 32/120 (26%), Positives = 38/120 (31%)
Frame = +3
Query: 552 PQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPP 731
P T P P + +PP P P P + L P + PP+ P P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAI---PGRSAPALPPLGNAS--RTSTPPVPTPPSLP 424
Query: 732 XSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPPP 911
S PP P P P P P P +P P P PP P P P
Sbjct: 425 PS-APPSLP-PSAPPSLPMGAPAAPPL--PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 34.7 bits (76), Expect = 0.018
Identities = 27/114 (23%), Positives = 31/114 (27%)
Frame = +3
Query: 570 PXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPP 749
P P P + SPP+ P AP + PP+ P PP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPI-APVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 750 RXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPPP 911
P P P P PP PL PP PPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPP-PPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 33.9 bits (74), Expect = 0.032
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = +3
Query: 606 PPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXP 785
PP P P S A +PP P R P PPP S P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 786 XXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPP 908
P P P PP P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 33.5 bits (73), Expect = 0.043
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = +3
Query: 666 PXPSPPIX-PXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPP 842
P PP P P P PPP + P P P P P P PP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP--VSMNPAINSTSKPPLPP 294
Query: 843 SXPXXXXXPLXXPPXXXPPXPPP 911
L PP PPP
Sbjct: 295 PSSRVSAAALAANKKRPPPPPPP 317
Score = 33.5 bits (73), Expect = 0.043
Identities = 33/118 (27%), Positives = 37/118 (31%), Gaps = 4/118 (3%)
Frame = +3
Query: 510 PLXXXXCVSGVCXPPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIX 689
PL VS PP P P P S P T L P P +
Sbjct: 378 PLSSSRAVSNPPAPP-----PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 690 PXRXP--PLXXPXPPPXSXGPPRXP-XPPXXPXXPXXXXXXPXXXXPXXSPXP-PSXP 851
P P P+ P PP PP P PP P P P +P P P+ P
Sbjct: 433 PSAPPSLPMGAPAAPPL---PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 39.5 bits (88), Expect = 6e-04
Identities = 22/49 (44%), Positives = 22/49 (44%)
Frame = -1
Query: 906 GGGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
G GG G G G GRGG G GGA GG G G RG GG
Sbjct: 6 GSRGGRG--GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/48 (41%), Positives = 20/48 (41%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
GG G G GA G G GG GGA GG G G G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 906 GGGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXR 775
GGG G G G G GRGG GG+ GG G G +
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 36.3 bits (80), Expect = 0.006
Identities = 26/73 (35%), Positives = 27/73 (36%)
Frame = -3
Query: 907 GGXGGXXXGGXXRGXXXXXGXEGGXGEXXGXXXXGXXXXXXGX*GXXGGXGXRGGPXEXG 728
G GG GG G G GG G G G G G GG G RGG
Sbjct: 6 GSRGGR--GGSRGGRGGFNGGRGGFGGGRGGARGG------GRGGARGGRGGRGGARGGR 57
Query: 727 GGXGXXRGGXRXG 689
GG RGG + G
Sbjct: 58 GGSSGGRGGAKGG 70
Score = 34.7 bits (76), Expect = 0.018
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGGG-GXXXGGAGGGXXGXXAGXRGXXGG 760
GG G G G GRGG G GGA GG G G RG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG-RGGRGGARGGRGG 59
Score = 34.3 bits (75), Expect = 0.024
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 784 GX*GXXGGXGX-RGGPXEXGGGXGXXRGGXRXGXIGGDG 671
G G GG G GG GGG G RGG R G GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -1
Query: 906 GGGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRG 772
GG GG G G GRGG G GG GG G G +G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS-SGGRGGAKG 69
Score = 33.1 bits (72), Expect = 0.056
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -3
Query: 775 GXXGGXGXRGGPXEXGGGXGXXRGGXRXGXIGGDGXGXRXSXVXVGAXEXXGPGCGG 605
G G G RGG GG G RGG R G GG G G G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -3
Query: 766 GGXGXRGGPXEXGGGXGXXRGGXRXGXIGGDGXGXRXSXVXVGAXEXXGPGCGG 605
G G RGG GG RGG G G G G + G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 39.1 bits (87), Expect = 9e-04
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +2
Query: 173 RXIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAR--AGETRF---TDTRKXEXDRCIXXK 337
+ IRN+ + AH+D GK+T T+ ++ G I G+ D + E ++ I +
Sbjct: 57 KQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGITIQ 116
Query: 338 STAISMFFELXEXXXVFITNPDXXXXXXXGFLIXXIDSPGPXDLSSEXXAALRXXDG 508
S A +E N + I ID+PG D + E ALR DG
Sbjct: 117 SAATHCTWE--RTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDG 171
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.1 bits (87), Expect = 9e-04
Identities = 32/83 (38%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = -3
Query: 910 GGGXGGXXXGGXXRGXXXXXGXEGGXGEXXGXXXX--GXXXXXXGX*GXXGGXGX-RGGP 740
GGG GG GG G G GG G G G G G GG G GGP
Sbjct: 187 GGGFGGF--GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 739 XEXGGGXGXXRGGXRXGXIGGDG 671
GGG G GG G GG G
Sbjct: 245 GGFGGGLGGF-GGGPGGFGGGPG 266
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = -1
Query: 906 GGGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
GG GG G G G G GGG GG GG G G G GG
Sbjct: 221 GGHGGFG--GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 33.1 bits (72), Expect = 0.056
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -1
Query: 906 GGGGGXXXXGXXG-AXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
GGG G G G G G G GG GGG G G G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRG 772
GGG G G G G GGG GG GG G G G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 31.9 bits (69), Expect = 0.13
Identities = 34/112 (30%), Positives = 34/112 (30%), Gaps = 1/112 (0%)
Frame = -3
Query: 907 GGXGGXXXGGXXRGXXXXXGXEGGXGEXXGXXXXGXXXXXXGX*GXXGGXGXR-GGPXEX 731
GG G G GG G G G G G GG G GG
Sbjct: 169 GGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGF--GGFGGFGGEGHHHGGHGGF 226
Query: 730 GGGXGXXRGGXRXGXIGGDGXGXRXSXVXVGAXEXXGPGCGGXXIG*XXGXG 575
GGG G GG G GG G G GPG G G G G
Sbjct: 227 GGGPGGFEGG--PGGFGGGPGGFGGGLGGFGG----GPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGG--GGXXXGGAGGGXXGXXAGXRGXXG 763
GG G G G G G GG GG G G G G G G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/88 (29%), Positives = 27/88 (30%)
Frame = +3
Query: 621 PXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXX 800
P + AP L P S P P PP PP S PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP-IPSSLPPPAQPAAPVK 182
Query: 801 XPXXXXPXXSPXPPSXPXXXXXPLXXPP 884
P S PP P PL P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/83 (31%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +3
Query: 672 PSPPIXPXRXPPLXXPXP-PPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPP-- 842
PS P P L P PP PP P P P P P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPP--PSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 843 SXPXXXXXPLXXPPXXXPPXPPP 911
S P P PP PPP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPP 205
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/100 (26%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Frame = +3
Query: 606 PPHPGPXXS*APTXTXDXLXPXPS-PPIXPXRXPPLXXPXPP-PXSXGPPRXPXPPXXPX 779
P P P + P PS PP P PP+ PP P S PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 780 XPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPP 899
P P PP P PP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 35.1 bits (77), Expect = 0.014
Identities = 29/120 (24%), Positives = 34/120 (28%)
Frame = +3
Query: 549 PPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPP 728
PP+ + P PI S P P P + PS P P PP+ PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 729 PXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXPPXPP 908
PP P P P + P P P PP PP
Sbjct: 204 -----PPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGP---SIPSASVPPVPP 255
Score = 34.3 bits (75), Expect = 0.024
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +3
Query: 675 SPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXX-PXXXXXXPXXXXPXXSPXPPSXP 851
+PP P PP P + PPR PP P P P P P+ P
Sbjct: 123 APPSAPA--PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 852 XXXXXPLXXPPXXXPPXPP 908
P PP PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPP 199
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 37.1 bits (82), Expect = 0.003
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 179 IRNMSVIAHVDHGKSTLTDSLVSKAGI---IAGARAGETRFTDTRKXEXDRCIXXKSTAI 349
IRN+ +IAH+D GK+TLT+ ++ G G+T D E R I S AI
Sbjct: 28 IRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDT-VMDYLPAERQRGITINSAAI 86
Query: 350 S 352
S
Sbjct: 87 S 87
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +3
Query: 549 PPQTVLXPXPXPXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPP 728
PP V+ P P P P+ P P P P P P PP PP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPV---PPPAPIMGGPP--------PPPPPPGVAGAGPPPPPPPPP 783
Query: 729 PXSXGPPR--XPXPPXXP 776
S G R P P P
Sbjct: 784 AVSAGGSRYYAPAPQAEP 801
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 775 PXPRXXPXXPPXXXXXGXPPXPPPXXXXXXXPXXXXPXXXPPXP 906
P P P PP G PP PPP P P PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP----PPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = +3
Query: 597 IXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXP 776
+ SPP P P PT P P+P P P + P PPP G PP P
Sbjct: 729 LKSPPPPPPAVI-VPT-------PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Query: 777 XXP 785
P
Sbjct: 781 PPP 783
Score = 29.9 bits (64), Expect = 0.52
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +3
Query: 666 PXPSPP--IXPXRXP-PLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXS 830
P P PP I P P P+ P P P GPP PP P P P S
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/69 (26%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +3
Query: 660 LXPXPSPPIXPXRXPPLXXPXPPPXSX-----GPPRXPXPPXXPXXPXXXXXXPXXXXPX 824
L P S + + L P PPP + P P PP P P
Sbjct: 713 LLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Query: 825 XSPXPPSXP 851
P PP P
Sbjct: 773 AGPPPPPPP 781
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 36.3 bits (80), Expect = 0.006
Identities = 32/123 (26%), Positives = 39/123 (31%), Gaps = 5/123 (4%)
Frame = +3
Query: 552 PQTVLXPXPX--PXXXPIXSPPHP--GPXXS*APTXTXDXLXPX-PSPPIXPXRXPPLXX 716
P+ + P P P + S P P P AP+ + P P P P R P +
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQR-PAVPV 627
Query: 717 PXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPPXXXP 896
P PP P P P P P P PP+ P P P P
Sbjct: 628 VPEAPSVPQPPAAPVVPEVPSVP-QRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Query: 897 PXP 905
P
Sbjct: 687 VVP 689
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Frame = +3
Query: 672 PSPPIXPXRXPPLXXPXPPPXSXGP--PRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPS 845
P PP+ P P P P P P PP P P P P PS
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVV-PEAPS 663
Query: 846 XPXXXXXPLXXPPXXXPPXPP 908
P P+ P P PP
Sbjct: 664 VPQPPAAPV-VPEVPSVPQPP 683
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 179 IRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKXEXDRCIXXKSTAISM 355
+R+ V H+ HGKS L D LV + R+TDT E +R + KST +++
Sbjct: 140 VRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTL 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.056
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +3
Query: 666 PXPSPPIXP--XRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXP 839
P +PP+ P P + P PPP P P PP P P P P S
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPPSAPPPPLPASS--A 1740
Query: 840 PSXP 851
PS P
Sbjct: 1741 PSVP 1744
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +3
Query: 675 SPPIXPXRXPPLXXPXPP-PXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSP---XPP 842
+P + P P PP P S PP P P P P P +P PP
Sbjct: 1462 APGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPP 1521
Query: 843 SXPXXXXXPLXXPPXXXPP 899
S P PP P
Sbjct: 1522 SQSSFAHVPSPAPPAPQHP 1540
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = +3
Query: 603 SPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXX 782
+P HP S P P S P P PP+ P PP PP PP P
Sbjct: 1682 APAHP---VSTPPVRPQSAAPPQMSAPTPPP--PPMSVPPPPS---APPMPAGPPSAPPP 1733
Query: 783 PXXXXXXPXXXXP 821
P P P
Sbjct: 1734 PLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 582 PXXXPIXSPPHPGPXXS*APTXTXDXLXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPX 761
P P P P APT + P P P P P PP + P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 762 P 764
P
Sbjct: 1746 P 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 681 PIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPP 842
P P PP+ P P P PP P P P +P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPM--SVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +3
Query: 705 PLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPSXPXXXXXPLXXPP 884
P+ P P S PP+ P P P P PPS P P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP-------------PMSVPPPPSAPPMPAGPPSAPP 1732
Query: 885 XXXPPXPPP 911
P P
Sbjct: 1733 PPLPASSAP 1741
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 784 GX*GXXGGXGXRGGPXEXGGGXGXXRGGXRXG 689
G G GG G GG GGG G RGG R G
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGG-GGXXXGGAGGGXXG 793
GGG G G G GRGG GG G GG G
Sbjct: 446 GGGSRGGRGGFGGRGGFG-GRGGFGGGRGRGRGGARSG 482
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 870 GAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
GA G GRGG G GG GG G RG GG
Sbjct: 129 GARNGPA-GRGGRGGFRGGRGGSRGGFGGNSRGGFGG 164
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 906 GGGGGXXXX--GXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
GG GG G G G G GGG G GG G G RG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 775 GXXGGXGXRGGPXEXGGGXGXXRGGXRXGXIGGDGXGXR 659
G G RGG GG G RGG GG G G R
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSR 167
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 906 GGGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRG 772
GG G G G G GGG G GG G G RG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -3
Query: 784 GX*GXXGGXGXRG-GPXEXGGGXGXXRGGXRXGXIGGDGXGXR 659
G G GG G G GG G RGG R G GG G R
Sbjct: 149 GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFR 191
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = -3
Query: 871 RGXXXXXGXEGGXGEXXGXXXXGXXXXXXGX*GXXGGXGXRGG--PXEXGGGXGXXRGGX 698
+G GG G G G GG G RGG GG G RGG
Sbjct: 128 KGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGG-GSRGGFGGGSRGGSRGGFRGGS 186
Query: 697 RXGXIG 680
R G G
Sbjct: 187 RGGFRG 192
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 775 GXXGGXGXRGGPXEXGGGXGXXRGGXRXGXIGGDGXGXR 659
G G G GG GG G RGG G GG G R
Sbjct: 146 GRGGSRGGFGG-NSRGGFGGGSRGGFGGGSRGGSRGGFR 183
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -1
Query: 903 GGGGXXXXGXXGAXXGXXXGRGGGGXXXGGAGGGXXGXXAGXRGXXGG 760
G G G G G GG G GG G G RG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSLVSKAG 256
K++ N+ VI HVD GKST T L+ K G
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSLVSKAG 256
K++ N+ VI HVD GKST T L+ K G
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSLVSKAG 256
K++ N+ VI HVD GKST T L+ K G
Sbjct: 3 KEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSL 241
+K+ N+ I HVDHGK+TLT ++
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTAAI 73
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.40
Identities = 27/97 (27%), Positives = 29/97 (29%), Gaps = 5/97 (5%)
Frame = +3
Query: 636 APTXTXDXLXPXPSPPIXPXRXPPLXXPXPP-PXSXGPPRXPXPPXXPXXPXXXXXXPXX 812
APT + P P P P P P PP P PP P
Sbjct: 155 APTVSAPNSMVSPPPSFQP---PSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDD 211
Query: 813 XXPXX---SPX-PPSXPXXXXXPLXXPPXXXPPXPPP 911
SP PP+ PL PP PP PP
Sbjct: 212 YYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/62 (25%), Positives = 18/62 (29%)
Frame = +3
Query: 666 PXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXPPXXPXXPXXXXXXPXXXXPXXSPXPPS 845
P P P + PL P PPP PP+ P P PS
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 846 XP 851
P
Sbjct: 281 QP 282
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 690 PXRXPPLXXPXPPPXSXGPPRXPXPPXXP 776
P PP P PPP PP P PP P
Sbjct: 5 PPGNPP---PPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 819 PXXSPXPPSXPXXXXXPLXXPPXXXPPXPPP 911
P +P PP P P PP PP PPP
Sbjct: 5 PPGNPPPPPPP-----PGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 672 PSPPIXPXRXPPLXXPXPPP 731
P PP P PP P PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +3
Query: 660 LXPXPSPPIXPXRXPPLXXPXPPPXSXGPPRXPXP--PXXPXXPXXXXXXPXXXXPXXSP 833
L P + P P PL PP + PP P P P P P P P +
Sbjct: 477 LVPSQNAPFIPGTSAPL-----PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMA- 530
Query: 834 XPPSXP 851
PP P
Sbjct: 531 LPPGMP 536
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 188 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 289
++++ HVDHGK+TL D+ K+ I + G T+
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQ 206
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 185 NMSVIAHVDHGKSTLTDSLVSKAGII 262
N+ I HVD GKSTL +++ G++
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV 265
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,063,320
Number of Sequences: 5004
Number of extensions: 30168
Number of successful extensions: 320
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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