Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_P19
(912 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 32 0.008
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 32 0.008
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.044
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.72
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 1.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.9
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 5.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.7
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSLVSKAG 256
K++ N+ VI HVD GKST T L+ K G
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 167 KKRXIRNMSVIAHVDHGKSTLTDSLVSKAG 256
K++ N+ VI HVD GKST T L+ K G
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 188 MSVIAHVDHGKSTLTDSL 241
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.72
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 185 NMSVIAHVDHGKSTLTDSL 241
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 24.6 bits (51), Expect = 1.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 39 LRFLPFSKRTPLLAYGSW 92
+R+ PF ++T + +GSW
Sbjct: 149 VRYFPFDQQTCFMKFGSW 166
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 2.2
Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 45 FLPFSKRTPLLAYGSW-FNRTKI 110
+ PF ++T ++ +GSW FN ++
Sbjct: 157 YFPFDQQTCIMKFGSWTFNGDQV 179
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 39 LRFLPFSKRTPLLAYGSW 92
+ + PF ++T +L +GSW
Sbjct: 157 VEYFPFDEQTCVLKFGSW 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.9
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 39 LRFLPFSKRTPLLAYGSW 92
+ + PF ++T ++ +GSW
Sbjct: 153 VEYFPFDEQTCVMKFGSW 170
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/31 (25%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 39 LRFLPFSKRTPLLAYGSW-FNRTKI-XNHLK 125
+ + PF +++ ++ +GSW +N ++ H+K
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVDLKHMK 192
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 5.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 39 LRFLPFSKRTPLLAYGSW 92
+ + PF ++T + +GSW
Sbjct: 149 VEYFPFDEQTCFMKFGSW 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 879 PPXXXPPXPPP 911
PP PP PPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 702 PPLXXPXPPPXSXGPP 749
PP P PPP S P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/40 (30%), Positives = 13/40 (32%), Gaps = 3/40 (7%)
Frame = +1
Query: 775 PXPRXXPXXPPXXXXXGXPPXP---PPXXXXXXXPXXXXP 885
P P+ P P G PP P PP P P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,450
Number of Sequences: 438
Number of extensions: 4236
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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