Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P18
         (922 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    28   0.12 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   3.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   7.7  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
 Frame = +2

Query: 437 PPPPXXXPXPXXPXXXXXXXXPPPXPXXPP---PPPXPPXXXXP 559
           P P    P P  P         PP P  PP   PP  PP    P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +2

Query: 581 PPPPPXXXPXAXPPPXPXXPPXPXXPXXPP 670
           P  PP        PP P  PP P  P  PP
Sbjct: 162 PALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 26.6 bits (56), Expect = 0.27
 Identities = 15/53 (28%), Positives = 15/53 (28%)
 Frame = +2

Query: 587 PPPXXXPXAXPPPXPXXPPXPXXPXXPPXXXXXXXXPPXPXPXXPPXPPXPPP 745
           PP        P   P        P  PP        PP P     P PP  PP
Sbjct: 139 PPGNVLNLTMPKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 876 PPPPPPP 896
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 745 GXGXXXXGGGXGGGXGGXXGXXG 677
           G      GGG GGG  G  G  G
Sbjct: 85  GENNDDSGGGRGGGRDGDRGDGG 107


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/40 (27%), Positives = 11/40 (27%)
 Frame = +1

Query: 760 PPPPXXPPPPXXXXXXXXXXXXXXXXPPXPPPPPXXXXXP 879
           PP    P P                 PP P PPP     P
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111



 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 502 PPXXXXPXPXXXXPXPXPPXXXXPXPPPXPXP 597
           PP    P P    P         P  PP P P
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSP 103


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 885 PPPPXPXPXPPP 920
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 885 PPPPXPXPXPP 917
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 885 PPPPXPXPXPP 917
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 11/35 (31%), Positives = 11/35 (31%)
 Frame = +2

Query: 437 PPPPXXXPXPXXPXXXXXXXXPPPXPXXPPPPPXP 541
           P P    P P  P          P P  PP P  P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.162    0.631 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,090
Number of Sequences: 336
Number of extensions: 7060
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)