Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P17
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380...    30   2.2  
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287...    29   6.7  
04_02_0011 - 8513471-8513673,8513815-8513869                           29   6.7  
03_06_0273 + 32787021-32787434,32788096-32788221,32788305-327883...    29   6.7  

>07_01_0511 +
           3806475-3806876,3807914-3808039,3808120-3808193,
           3808278-3808347,3808431-3808486,3808578-3808649,
           3808678-3808811,3808967-3809030,3809111-3809240,
           3809326-3809541,3809629-3809750,3810527-3810701,
           3810788-3810878,3811040-3811197,3811330-3811518,
           3813257-3813340,3813362-3813536,3815300-3815955,
           3816226-3816648,3816752-3816790
          Length = 1151

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 361 SGPDTPSVYLLLLYKLAW*CNLGKYYRWWXKEPTAGXQGADAIH-GGIQG 215
           +GPD   V L L ++ +  CN G  Y W       G  G  A+H  G QG
Sbjct: 170 TGPDAYEVALKLEHRNSKGCNYGAPYEWQVYHNLNGCYGIPAVHYKGRQG 219


>08_01_0321 +
           2872609-2873027,2873477-2873905,2874743-2874944,
           2875909-2875947,2876309-2876354,2877380-2877922,
           2878827-2880847,2880972-2881215,2881642-2881684,
           2881923-2881962,2883580-2883675,2883712-2883759,
           2883964-2884290
          Length = 1498

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = +2

Query: 155 PSTCHRWCRRLGXLEQWRSQPLDTSMDRIGSLXTRSGLLX-----PPSVVLA*IALPSKF 319
           P  C R   R      WR   L +++  +G   T++  L      P +   A  +LPS+ 
Sbjct: 329 PGFCPRQLGRASMFTMWRVVGLVSTLVYVGLTRTKASNLHADKGGPGTNQAATPSLPSQT 388

Query: 320 VQK*EVYRGRVWTRLFLTATSENAPLPP 403
           +     Y+G   TR   T  + N+P PP
Sbjct: 389 IATTPGYQGARLTRDSRTRGARNSPPPP 416


>04_02_0011 - 8513471-8513673,8513815-8513869
          Length = 85

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 265 APXTTIGSTCLDCTTKQVCTKVGGIQRACLDPT-LPYCNLGECSATP 402
           AP T +   C+D T K +C+     +  C     L YCN   C+ +P
Sbjct: 33  APITEVPKPCVDATCKAICSDKYQSKGECFSTDGLYYCNF--CANSP 77


>03_06_0273 +
           32787021-32787434,32788096-32788221,32788305-32788378,
           32788468-32788537,32788622-32788677,32788762-32788833,
           32788945-32789039,32789196-32789262,32789359-32789488,
           32789578-32789793,32789887-32790017,32790719-32790893,
           32790977-32791067,32792151-32792308,32792763-32792951,
           32793066-32793125
          Length = 707

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -2

Query: 361 SGPDTPSVYLLLLYKLAW*CNLGKYYRWWXKEPTAGXQGADAIH 230
           +GPD   V L   ++ +  CN G  Y W       G  G  ++H
Sbjct: 174 TGPDAQEVALKFEHRSSKGCNYGPPYEWQVYHTLNGCYGIPSVH 217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,110,566
Number of Sequences: 37544
Number of extensions: 265736
Number of successful extensions: 645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)