Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P17
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    29   4.6  
AC084158-40|AAM15618.2|  354|Caenorhabditis elegans Hypothetical...    29   6.0  
AC084158-39|AAM15616.2|  483|Caenorhabditis elegans Hypothetical...    29   6.0  
AC084158-38|AAM15617.2|  488|Caenorhabditis elegans Hypothetical...    29   6.0  
AC084158-37|AAM15615.2|  486|Caenorhabditis elegans Hypothetical...    29   6.0  

>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 257 GXPGSRCDPWRYPRVD--CAIVPAXPTAGTT 171
           G PGS CDP RY  +D  C++ P   T  TT
Sbjct: 177 GEPGSACDPDRY-NIDGLCSLNPPTTTTTTT 206


>AC084158-40|AAM15618.2|  354|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.1d protein.
          Length = 354

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 466 KYNLYFSPRKYITDRKKFFFWKKLTKNVIKSVSLPLCSL 582
           KY +YF+PR  I  + +  +W     N  KS+   L SL
Sbjct: 106 KYPMYFTPRSVIDFQMRNNYWIPRHNNTFKSLRTRLYSL 144


>AC084158-39|AAM15616.2|  483|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.1b protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 466 KYNLYFSPRKYITDRKKFFFWKKLTKNVIKSVSLPLCSL 582
           KY +YF+PR  I  + +  +W     N  KS+   L SL
Sbjct: 106 KYPMYFTPRSVIDFQMRNNYWIPRHNNTFKSLRTRLYSL 144


>AC084158-38|AAM15617.2|  488|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.1c protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 466 KYNLYFSPRKYITDRKKFFFWKKLTKNVIKSVSLPLCSL 582
           KY +YF+PR  I  + +  +W     N  KS+   L SL
Sbjct: 111 KYPMYFTPRSVIDFQMRNNYWIPRHNNTFKSLRTRLYSL 149


>AC084158-37|AAM15615.2|  486|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.1a protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 466 KYNLYFSPRKYITDRKKFFFWKKLTKNVIKSVSLPLCSL 582
           KY +YF+PR  I  + +  +W     N  KS+   L SL
Sbjct: 109 KYPMYFTPRSVIDFQMRNNYWIPRHNNTFKSLRTRLYSL 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,903,530
Number of Sequences: 27780
Number of extensions: 230590
Number of successful extensions: 557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)