Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P17
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   6.7  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/46 (28%), Positives = 15/46 (32%), Gaps = 3/46 (6%)
 Frame = +1

Query: 169 PVVPAVGXAGTMAQSTLGYLHGSHRLPGYP---QWAPXTTIGSTCL 297
           P+ P  G           Y       PG+P    W P T I   CL
Sbjct: 82  PIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDCL 127


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/46 (28%), Positives = 15/46 (32%), Gaps = 3/46 (6%)
 Frame = +1

Query: 169 PVVPAVGXAGTMAQSTLGYLHGSHRLPGYP---QWAPXTTIGSTCL 297
           P+ P  G           Y       PG+P    W P T I   CL
Sbjct: 82  PIEPWHGVLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDCL 127


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 328 VGGIQRACLDPTLPYC 375
           V G   AC +P+L YC
Sbjct: 165 VTGKTTACFEPSLDYC 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,415
Number of Sequences: 438
Number of extensions: 2932
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)