Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_P16
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 154 1e-37
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 138 4e-33
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 125 4e-29
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 31 1.2
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.2
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 31 1.2
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 30 2.8
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 30 2.8
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 154 bits (373), Expect = 1e-37
Identities = 79/158 (50%), Positives = 93/158 (58%)
Frame = +2
Query: 221 NPLFEXXPKXFAIGXGXQPTRDLSRFVXWPXYIRIQRQKAVLQRRLKVPPPINQFTQTLD 400
NPLFE PK F IG P +DL RFV WP +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 401 XXTAKGLFKXLEXYXPETEAAXKXXLRXXXXXXXXXXXXXXXXRPNTIRSGTNTVXXXXX 580
A LFK L Y PE +AA K L +P ++ G N V
Sbjct: 82 KNLATNLFKMLLKYRPEDKAAKKERL-LKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 140
Query: 581 XXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCXVKG 694
IAHDVDPIELV++LPALCRKM VPYC VKG
Sbjct: 141 QSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 138 bits (335), Expect = 4e-33
Identities = 72/151 (47%), Positives = 87/151 (57%)
Frame = +2
Query: 221 NPLFEXXPKXFAIGXGXQPTRDLSRFVXWPXYIRIQRQKAVLQRRLKVPPPINQFTQTLD 400
NPLFE PK F IG P +DL RFV WP +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 401 XXTAKGLFKXLEXYXPETEAAXKXXLRXXXXXXXXXXXXXXXXRPNTIRSGTNTVXXXXX 580
A LFK L Y PE +AA K L +P ++ G N V
Sbjct: 66 KNLATNLFKMLLKYRPEDKAAKKERL-LKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 124
Query: 581 XXXXXXXXIAHDVDPIELVLFLPALCRKMGV 673
IAHDVDPIELV++LPALCRKM +
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 125 bits (302), Expect = 4e-29
Identities = 72/159 (45%), Positives = 87/159 (54%)
Frame = +2
Query: 218 VNPLFEXXPKXFAIGXGXQPTRDLSRFVXWPXYIRIQRQKAVLQRRLKVPPPINQFTQTL 397
VNPLFE PK F IG P +DL RFV WP +RIQRQ+ VL++RLKVPP +NQFT+TL
Sbjct: 22 VNPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTL 81
Query: 398 DXXTAKGLFKXLEXYXPETEAAXKXXLRXXXXXXXXXXXXXXXXRPNTIRSGTNTVXXXX 577
D G K + EA K +P ++ G + V
Sbjct: 82 DKNL--GCQKERLLKRAQAEAEGK---------------TVEAKKPIVVKYGLDHVTYLI 124
Query: 578 XXXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCXVKG 694
IAHDVDPIELV++LPALCRKM +PYC VKG
Sbjct: 125 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 163
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 542 IRSGTNTVXXXXXXXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCXVKGXSA 703
++ G N +A D +P+E++L LP L VPY V A
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQA 86
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 319 PHPAPEGCTSASSESAPSDQP 381
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 542 IRSGTNTVXXXXXXXXXXXXXIAHDVDPIELVLFLPALCRKMGVPYCXVKGXSA 703
++ G N +A D +P+E++L LP L VPY V A
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQA 88
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 605 IAHDVDPIELVLFLPALCRKMGVPYCXV 688
IA ++ PI+++ +P LC + +PY V
Sbjct: 66 IAGNISPIDVITHVPILCEEANIPYVYV 93
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 605 IAHDVDPIELVLFLPALCRKMGVPYCXV 688
IA ++ PI+++ +P LC + +PY V
Sbjct: 66 IAGNISPIDVITHVPILCEEANIPYIYV 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,137,643
Number of Sequences: 37544
Number of extensions: 300081
Number of successful extensions: 648
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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