Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P14
         (1321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   2.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 1296 PPPPPPP 1316
            PPPPPPP
Sbjct: 731  PPPPPPP 737



 Score = 23.8 bits (49), Expect = 2.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 1299 PPPPPPP 1319
            PPPPPPP
Sbjct: 731  PPPPPPP 737



 Score = 23.8 bits (49), Expect = 2.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 1301 PPPPPPP 1321
            PPPPPPP
Sbjct: 731  PPPPPPP 737


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,747
Number of Sequences: 336
Number of extensions: 1332
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 39049180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)