Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P14
         (1321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       24   6.7  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    24   6.9  
07_03_1382 - 26170563-26170631,26171151-26171843                       24   7.5  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 23.8 bits (49), Expect(2) = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1297 PPPPPPP 1317
            PPPPPPP
Sbjct: 313  PPPPPPP 319



 Score = 23.8 bits (49), Expect(2) = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 1296 PPPPPPP 1316
            PPPPPPP
Sbjct: 326  PPPPPPP 332



 Score = 23.8 bits (49), Expect(2) = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1300 PPPPPPP 1320
            PPPPPPP
Sbjct: 353  PPPPPPP 359



 Score = 23.8 bits (49), Expect(2) = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 1299 PPPPPPP 1319
            PPPPPPP
Sbjct: 364  PPPPPPP 370


>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 23.8 bits (49), Expect(2) = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1297 PPPPPPP 1317
            PPPPPPP
Sbjct: 54   PPPPPPP 60



 Score = 23.8 bits (49), Expect(2) = 6.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1300 PPPPPPP 1320
            PPPPPPP
Sbjct: 92   PPPPPPP 98


>07_03_1382 - 26170563-26170631,26171151-26171843
          Length = 253

 Score = 23.8 bits (49), Expect(2) = 7.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1297 PPPPPPP 1317
            PPPPPPP
Sbjct: 184  PPPPPPP 190



 Score = 23.8 bits (49), Expect(2) = 7.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 1300 PPPPPPP 1320
            PPPPPPP
Sbjct: 200  PPPPPPP 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,582,954
Number of Sequences: 37544
Number of extensions: 446832
Number of successful extensions: 37607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15423
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)