Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P12
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    24   2.1  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   4.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 461  YRSPQPNDRAQRVSEPRKRKSAQYANRLSPXVG 363
            Y  PQP +  Q  ++ + +  +Q AN+  P  G
Sbjct: 997  YTPPQPANAQQGQAQAQAKPQSQEANKPKPATG 1029


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 531 SHVLSCVIPLILWITVLPPLSEXIPL 454
           S +LS V+ L+L   +LPP S  +PL
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPL 295


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 552 GLLLAFCSHVL-SCVIPLILWITVLPPLSEXIPL 454
           G  ++ CS +L S  +  +L   ++PP S  IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 488 PYYRL*VSXYRSPQPNDRAQRVSEPRKRKSAQY 390
           PY +L V   R   P    QRV +  KR+  +Y
Sbjct: 160 PYKKLSVEVVRREHPFWDDQRVEQEAKRRFEKY 192


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -3

Query: 626 DFCDARSGGRSLWKNASNXAFLRFLAFCW 540
           D C   SGG  LW+N      +      W
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNIGIISW 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,036
Number of Sequences: 438
Number of extensions: 3401
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)