Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P11
         (1388 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            21   7.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 19/59 (32%), Positives = 19/59 (32%)
 Frame = -3

Query: 726 GXXGGGSXXGLXAGXLRGEPXXGPGGVXVXLXHGXXXS*XXIXXEGXGXXXGGXGGXXL 550
           G  GGGS  G   G        GPGG                  EG G   GG GG  L
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQL 259


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 21.4 bits (43), Expect(2) = 7.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 650 PPGPXXGSPRNXPAXS 697
           PP P  G P   PA S
Sbjct: 594 PPSPLAGGPLGGPAGS 609



 Score = 21.0 bits (42), Expect(2) = 7.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 560 PPXPPXXSPXPS 595
           PP PP   P PS
Sbjct: 585 PPPPPPMGPPPS 596


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,026
Number of Sequences: 2352
Number of extensions: 5549
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 160526025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)