Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P07
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814...   165   4e-41
04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351...   153   1e-37
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213...    92   6e-19
05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,842...    29   5.0  
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885...    28   8.7  

>08_01_0835 +
           8147177-8147359,8147871-8147968,8148045-8148102,
           8148192-8148271,8148770-8148872,8148966-8149181
          Length = 245

 Score =  165 bits (401), Expect = 4e-41
 Identities = 83/174 (47%), Positives = 109/174 (62%)
 Frame = +1

Query: 211 VPESVLKHXXXXXXXXXXXLQVTLXXXXXXXXXXXXXFXRAEQYVKEYRIKERDEIXLAR 390
           VPESVLK             +  L             F RA+QY +EY  +E++ + L R
Sbjct: 11  VPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKELVQLKR 70

Query: 391 XARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVXML 570
            AR +G +YV  EAKL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+ ML
Sbjct: 71  EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINML 130

Query: 571 RIAEPYLAWGXPNLQSVRXLVYXRGFXXLSGQXIPXXSNSIVXTRLHKXXIICV 732
           R  EPY+A+G PNL+SVR L+Y RG+  L+ Q IP  +N ++   L K  IIC+
Sbjct: 131 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGLGKHDIICI 184


>04_04_1075 +
           30634141-30634320,30634917-30635014,30635113-30635170,
           30635259-30635338,30635686-30635788,30635847-30636080
          Length = 250

 Score =  153 bits (372), Expect = 1e-37
 Identities = 80/180 (44%), Positives = 108/180 (60%), Gaps = 6/180 (3%)
 Frame = +1

Query: 211 VPESVLKHXXXXXXXXXXXLQVTLXXXXXXXXXXXXXFXRAEQYVKEYRIKERDEIXLAR 390
           VPESVL+             +  +             F RA+QY +EY  +E++ + L R
Sbjct: 10  VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69

Query: 391 XARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINNGVFVRLNKATVXML 570
            AR +G +YV  E KL FV+RIRGIN + PK RK+LQL RLRQI NGVF+++NKAT+ ML
Sbjct: 70  EARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINML 129

Query: 571 RIAEPYLAWGXPNLQSVRXLVYXRGFXXLSGQXIPXXSNSIVXTR------LHKXXIICV 732
           R  EPY+A+G PNL+SVR L+Y RG+  L+ Q IP  +N ++         L K  IIC+
Sbjct: 130 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEESWCLYQGLGKHDIICI 189


>08_02_1442 +
           27120604-27120890,27121029-27121166,27121280-27121382,
           27121877-27122036,27122927-27123114,27123203-27124770,
           27124882-27125869,27126595-27127098,27127347-27127433,
           27127753-27127821,27128012-27128041
          Length = 1373

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = +1

Query: 328 RAEQYVKEYRIKERDEIXLARXARNRGNYYVPGE---AKLAFVIRIRGINQVSPKVRKVL 498
           R E +V+E+R KE D + +    + R     P E   +KL F IRI G   + P +R++L
Sbjct: 51  RPEDFVREFRNKELDFVRMKTRLKVRK--LPPAETLNSKLVFAIRIPGTMDLHPHMRRIL 108

Query: 499 QLFRLRQINNGVFVRLNKATVXMLRIAEPYLAWGXPNLQSVRXLVYXRGFXXLSGQXIPX 678
           +  RL Q+  GVF++   AT+  L + EP++ +G PNL++V+ L+Y +G   L  +  P 
Sbjct: 109 RKLRLTQVLTGVFLKATDATMKRLLVVEPFITYGFPNLKNVKDLIYKKGRGFLDKEPFPL 168

Query: 679 XSNSIVXTRLHKXXIICV 732
            SN ++   L +  IIC+
Sbjct: 169 TSNDLIEKALGEYGIICL 186


>05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,
            8427110-8427205,8427530-8427616,8428639-8428767,
            8428922-8429098,8429185-8429295,8429642-8429761,
            8430767-8432427,8432485-8432867,8433707-8434470,
            8434532-8434813,8436158-8436493
          Length = 1523

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 723  YLCLRTSIHXIFPXWXQSSXXPXISC 800
            YLCL   +    P W +SS  P +SC
Sbjct: 945  YLCLNCFVFSGLPAWIKSSLAPNLSC 970


>12_02_0398 -
           18586985-18587480,18587669-18587687,18588317-18588544,
           18589699-18589966
          Length = 336

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 422 PGKPNWHLSSESVVSTKFHRRSVKFCNCLDCAK 520
           PG+ NW   S  +V TK  R+S +  N +D A+
Sbjct: 100 PGQANWFPDSNLLVDTKGRRQSRRIKNLMDEAE 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,546,589
Number of Sequences: 37544
Number of extensions: 279256
Number of successful extensions: 485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)