Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P05
         (961 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   1.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   6.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   8.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   8.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   8.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 515 PPPPPPPXAXXXXYTXNT 568
           PPPPPPP       T  T
Sbjct: 731 PPPPPPPRVESFAETVRT 748


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/49 (26%), Positives = 14/49 (28%)
 Frame = +3

Query: 612 KXPXRPPPXXXXXXXPXPPXPFPLXPPXPXXPXPPPPXXXPPPXPPXPP 758
           K P RP         P P    P+           PP   PPP     P
Sbjct: 63  KAPIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/47 (27%), Positives = 13/47 (27%)
 Frame = +1

Query: 796 PHXPXPXPPXXXPPPPPXPXPXPXPXXXXPPPXPXXPPPXPPPPXXP 936
           P  P   PP    P P    P         P  P  P P P     P
Sbjct: 65  PIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111



 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/44 (27%), Positives = 12/44 (27%)
 Frame = +3

Query: 825 PXPPPPPXPXPXPXTXXXXTXXXPPXPPPXPPPPXXPPXPXXXP 956
           P   PP    P P              P  PP P  PP     P
Sbjct: 68  PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
 Frame = +3

Query: 672 PFPLXPPXPXX--PXPPPPXXXPPPXPPXPPP 761
           P P  PP        PP P   P P PP  PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +3

Query: 894 PPXP--PPXPPPPXXPP 938
           PP P  PP P PP  PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191



 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 672 PFPLXPPXPXXPXPPPPXXXP 734
           P P  PP P  P  PP    P
Sbjct: 176 PLPQVPPLPLPPIFPPTMINP 196



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/48 (29%), Positives = 14/48 (29%), Gaps = 4/48 (8%)
 Frame = +2

Query: 821 PPXXPPPPXXPP----PPXNXXXQXXXXXPXPPPPXPPPXXPPXPXXP 952
           P   P P    P    PP           P  PP   PP  PP    P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 763 GGGGXGGXGGGXXXGGG 713
           GGG  GG  G    GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 760 GGGXGGXGGGXXXGGGG 710
           GGG GG   G    GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 672 PFPLXPPXPXXPXPPPPXXXPP 737
           P+P+  P      PPP    PP
Sbjct: 267 PYPMQRPKSASLSPPPHVYNPP 288


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 835 PPPPXPXPXPXP 870
           PP P P P P P
Sbjct: 392 PPEPVPTPEPQP 403


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +2

Query: 782 PHXHHPTXXPPXPPPXXPPP 841
           PH       PP P P   PP
Sbjct: 727 PHEAFDVKLPPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +2

Query: 782 PHXHHPTXXPPXPPPXXPPP 841
           PH       PP P P   PP
Sbjct: 619 PHEAFDVKLPPPPHPHHQPP 638


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 902 PPPPXPPPXXPPXPXXPP 955
           PP    PP   P P  PP
Sbjct: 68  PPSGGQPPQGMPYPRFPP 85


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +1

Query: 796 PHXPXPXPPXXXP 834
           PH P P PP   P
Sbjct: 23  PHSPEPYPPRCPP 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,442
Number of Sequences: 336
Number of extensions: 8030
Number of successful extensions: 53
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27099446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)