Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P03
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.1  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   4.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   4.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   4.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = -3

Query: 424 HSSNRHHISNFKSXFLSTINKLACVEPFGSNEELLPXLELVWIAEVYNSQR 272
           +++  + ++  KS  L+   +L+    FG+   L    +L+W  EV N  R
Sbjct: 155 NTNESYELTVLKSDSLAV--RLSAANFFGARHGLETLNQLIWFDEVVNELR 203


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 303 TSSXQGRSSSLLPKGSTQANLFIVE 377
           TSS  GRS + LP   T+ + F ++
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQ 52


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 303 TSSXQGRSSSLLPKGSTQANLFIVE 377
           TSS  GRS + LP   T+ + F ++
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQ 52


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 303 TSSXQGRSSSLLPKGSTQANLFIVE 377
           TSS  GRS + LP   T+ + F ++
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQ 52


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -3

Query: 442 HNGTLRHSSNRHHISNFKSXFLSTINKLACVEPFGSNEELLPXLE 308
           H   L H+   HH+    S F S+ +      PF  N  LLP  E
Sbjct: 343 HQAMLHHNPMSHHLKQEPSGFTSSNH------PFSIN-RLLPTAE 380


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 493  WKLRHCDWTQS 525
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 573 TFLAPDGSFTLVR 535
           T   PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,076
Number of Sequences: 336
Number of extensions: 3607
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)