Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P03
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0812 + 23383704-23384143,23384902-23385247                      296   1e-80
07_01_1201 - 11419851-11419913,11420090-11420311                       33   0.29 
06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788,611...    33   0.29 
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    29   3.6  
03_03_0091 - 14371528-14372661                                         29   4.8  
02_05_0812 + 31942591-31942758,31943415-31943491,31944169-319443...    29   6.3  

>12_02_0812 + 23383704-23384143,23384902-23385247
          Length = 261

 Score =  296 bits (727), Expect = 1e-80
 Identities = 136/223 (60%), Positives = 166/223 (74%)
 Frame = +2

Query: 107 GRVXRAXRXGAGSVFVSXXQXRXGAPKLRSLXYAXRHGXIKGVVKXXIHXPGXGAPLAVV 286
           GRV RA R GAGSVF S    R G  + RSL +  R+G +KGVV   IH PG GAPLA V
Sbjct: 2   GRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKV 61

Query: 287 HFRDPYKFKXRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCXLEEKMG 466
            FR P+++K +KELF+A EG+YTGQFVYCG++ATL +GNV+P+ ++PEG +VC +E  +G
Sbjct: 62  TFRHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHVG 121

Query: 467 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSXRGMVGIVAGGGRIDKPILK 646
           DRG  ARASG++A VI HNPD   +R+KLPSGAKK++PSS R M+G VAGGGR +KP+LK
Sbjct: 122 DRGVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPMLK 181

Query: 647 AGRAYHKYKVXRNCWPYVRGVAMXPGXASSRWWYHQHIGXAST 775
           AG AYHKY+V RNCWP VRGVAM P         HQHIG AST
Sbjct: 182 AGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 224


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -1

Query: 630 SIRPPPATIPTMPLXLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSS 451
           ++ PPP  +P +P     R+   P G        +G  P        A  R+P +P+F S
Sbjct: 12  ALLPPPPPLPALPQGQQWRS-TGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70

Query: 450 R 448
           R
Sbjct: 71  R 71


>06_01_0811 -
           6113491-6113925,6114079-6114185,6114569-6114788,
           6115112-6115199,6115301-6115431,6115924-6116099,
           6116465-6116529,6117014-6117094,6117219-6117358,
           6117446-6117532,6117614-6117827,6118102-6118260,
           6118860-6118936,6119629-6119796
          Length = 715

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 613 WRWTY*QTYFESWKGIPQVQG 675
           W WTY  T+F SW  +P +QG
Sbjct: 70  WSWTYWSTFFLSWSIVPTLQG 90


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 490 LWKLRHCDWT 519
           LWK RHCDWT
Sbjct: 73  LWKCRHCDWT 82


>03_03_0091 - 14371528-14372661
          Length = 377

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
 Frame = -1

Query: 618 PPATIPTMPLXLDGRTFLAPDGS-FTLVRLASGLCPITVAKFPEARARRP-LSPIFSSRX 445
           PPA  P      D      P G+  T      G+ P + A    A A    L+P+F    
Sbjct: 254 PPAPAPAPVKAEDALPHFFPQGAAVTATAHVHGVDPASAAASAAANAEGGILAPLFKEMV 313

Query: 444 HTMVPSGIAPTGITFP 397
             M+ +G+AP  +  P
Sbjct: 314 RAMLTAGMAPPSLEPP 329


>02_05_0812 +
           31942591-31942758,31943415-31943491,31944169-31944327,
           31944559-31944772,31944849-31944935,31945022-31945161,
           31945380-31945460,31945948-31946012,31946219-31946394,
           31947212-31947342,31947438-31947525,31947671-31947884,
           31948206-31948312,31948456-31948953
          Length = 734

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 613 WRWTY*QTYFESWKGIPQVQG 675
           W W+Y  T+  +W  +P +QG
Sbjct: 70  WSWSYWSTFILTWAVVPTIQG 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,740,747
Number of Sequences: 37544
Number of extensions: 436369
Number of successful extensions: 1019
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)