Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P03
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   300   7e-82
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    36   0.037
Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  300 bits (737), Expect = 7e-82
 Identities = 136/223 (60%), Positives = 165/223 (73%)
 Frame = +2

Query: 107 GRVXRAXRXGAGSVFVSXXQXRXGAPKLRSLXYAXRHGXIKGVVKXXIHXPGXGAPLAVV 286
           GR  R  R GAG +F S  + R GA KLR L YA RHG IKG+VK  IH PG GAPLA++
Sbjct: 2   GRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAII 61

Query: 287 HFRDPYKFKXRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCXLEEKMG 466
            FRDPYK+K  K   +A EG++TGQF++CG KA +++GN++PVG +PEGT +C +E K G
Sbjct: 62  AFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSG 121

Query: 467 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSXRGMVGIVAGGGRIDKPILK 646
           DRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S  R M+G+VAGGGR DKP+LK
Sbjct: 122 DRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLK 181

Query: 647 AGRAYHKYKVXRNCWPYVRGVAMXPGXASSRWWYHQHIGXAST 775
           AGR+YHKYK  RN WP VRGVAM P         HQHIG  ST
Sbjct: 182 AGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPST 224


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 35.9 bits (79), Expect = 0.037
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
 Frame = +2

Query: 398 GNVMPVGAMPEGTIVCXLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 574
           GN  P+G++  GT++  +E     D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 575 LPSSXRGMVGIVAGGGRIDKPILKAGRAYHKY 670
           L  +    VG ++    ID  I  + + + ++
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRF 248


>Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical
           protein T05F1.8 protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 678 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLXLDGRTFLAP 559
           LT   W+   +FK+ +++ RPPP  +P      L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352


>U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical
           protein C33F10.12 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 678 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLXLDGRTFLAP 559
           LT   W+   +FK+ +++ RPPP  +P      L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 512 IGHNPDAKRTRVKLPSGAKKVLPSSXRGM 598
           IGH  D +RTR  LP+G KKVL  + + +
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVLVQNVKDL 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,261,832
Number of Sequences: 27780
Number of extensions: 347899
Number of successful extensions: 757
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)