Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P02
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 458 YVPYIIYVTYACIKRRLFKYYKQT 387
           YVP I+Y  Y       F  YK T
Sbjct: 329 YVPMILYCVYTTATYDSFMIYKTT 352


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 458 YVPYIIYVTYACIKRRLFKYYKQT 387
           YVP I+Y  Y       F  YK T
Sbjct: 54  YVPMILYCVYTTATYDSFMIYKTT 77


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 385 NVCL*YLNNRLLIHAYVTYIIY 450
           N C  ++  +L+   +VTY +Y
Sbjct: 528 NFCFGFITKQLIFMIFVTYQLY 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,055
Number of Sequences: 336
Number of extensions: 1635
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)