Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_P02
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    29   4.5  

>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 246 VAXVGPCAVPXCFCXRPNVRNXXTGKCVPXSEC**NCVN 362
           +    P   P C C   NVRN  TG  +P      NCV+
Sbjct: 54  ICTCSPPVPPKCVCTEGNVRNIITGPSLPALFKPYNCVS 92


>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 264 CAVPXCFCXRPNVRNXXTGKCVPXSEC 344
           C    C C +  VR+  TGKCV  ++C
Sbjct: 105 CMTNVCQCKKGLVRDSATGKCVEKNKC 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,179,493
Number of Sequences: 27780
Number of extensions: 145168
Number of successful extensions: 186
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)