Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O24
(1077 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.11 |rpl15||60S ribosomal protein L15|Schizosaccharomyces... 38 0.002
SPAC1783.08c |rpl1502|rpl15-2|60S ribosomal protein L15b|Schizos... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.091
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.28
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.49
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.85
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 7.9
>SPCC576.11 |rpl15||60S ribosomal protein L15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 144 VFCSRVRVWQYPSA*LVMHRAPRPTRADKAR 236
+F SRVR W+Y V+HRA RP+R DKAR
Sbjct: 20 LFLSRVRAWEYRQM-NVIHRASRPSRPDKAR 49
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 95 YRYIQELYRKKLSDVMRFL 151
Y+Y++EL +KK SDV FL
Sbjct: 4 YKYLEELAKKKQSDVNLFL 22
>SPAC1783.08c |rpl1502|rpl15-2|60S ribosomal protein
L15b|Schizosaccharomyces pombe|chr 1|||Manual
Length = 201
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 144 VFCSRVRVWQYPSA*LVMHRAPRPTRADKAR 236
+F SRVR W+Y V+HRA RP+R DKAR
Sbjct: 20 LFLSRVRAWEYRQM-NVIHRASRPSRPDKAR 49
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 95 YRYIQELYRKKLSDVMRFL 151
Y+Y++EL +KK SDV FL
Sbjct: 4 YKYLEELAKKKQSDVNLFL 22
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.091
Identities = 37/183 (20%), Positives = 51/183 (27%), Gaps = 2/183 (1%)
Frame = +3
Query: 396 PXXXTTPXXXXPCALXPPPRXXHHXPXXXPP-PXXHNRXPFXLXPTTVXPXLXNXPPPPS 572
P T P P + P P+ P PP P + P P+ P PP
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 573 GQXXXXPRTHXLXSLQYPXPXKXAXAXSYKHPTHPXXLSPXP-XPPXXXXXXXXXXXXXX 749
+ S+ P + A P+ P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 750 XSXXRPPPXPLXXSXPDPSSTXPRFHSXSXLXHHPPPXXAAXSPPSPXXHXXXPSXXXPX 929
S P P P + P P+ + PP + +PP P P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 930 TSP 938
T+P
Sbjct: 1215 TAP 1217
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = +2
Query: 848 PPPPXAXRXLPPXXPXXXXXPLPXXPXNLPQXPPRXPXTP 967
PP P +PP P P+P +P PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +3
Query: 765 PPPXPLXXSXPDPSSTXPRFHSXSXLXHHP----PPXXAAXSPPSPXXHXXXPSXXXP 926
PPP P+ P+S P+ H S P P A PP P P P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLP 1027
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 768 PPXPLXXSXPD---PSSTXPRFHSXSXLXHHPPPXXAAXSPPSPXXHXXXPSXXXPXTSP 938
PP P+ + P P+ST P S S PPP A P S PS P +P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA---PSSEIPSIPAPSGAPPVPAP 1088
Score = 27.5 bits (58), Expect = 3.4
Identities = 42/183 (22%), Positives = 50/183 (27%), Gaps = 3/183 (1%)
Frame = +3
Query: 396 PXXXTTPXXXXPCALXPPPRXXHHXPXXXPPPXXHNRXPFXLX-PTTVXPXLXNXPPP-P 569
P P P + P P+ P P P P P + P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 570 SGQXXXXPRTHXLXSLQYPXPXKXAXAXSYKHPTHPXXLSPXPXPPXXXXXXXXXXXXXX 749
SG + + P S P P S P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP-- 1194
Query: 750 XSXXRPPPXPLXXSXP-DPSSTXPRFHSXSXLXHHPPPXXAAXSPPSPXXHXXXPSXXXP 926
S P P P P P ST P + S P P A +PP P PS P
Sbjct: 1195 -SEAPPVPKPSVGVPPVPPPSTAPPVPTPSA-GLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Query: 927 XTS 935
+S
Sbjct: 1253 RSS 1255
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 972 RXGVXGXLGGXWGRLXGXXGRGXXXXSGXXGGRXRXAXGGGGXXXXXXSGSGG 814
R G G GG G G G G G GGR G GG GG
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -1
Query: 705 GGXGXXRGXRGXLGVYRXXXXRFXGGWDIGGKXVSXXGXXXGXGRRGGEARXXG 544
GG G RG RG R GG GG+ + G G RGG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.49
Identities = 39/167 (23%), Positives = 50/167 (29%), Gaps = 11/167 (6%)
Frame = +3
Query: 471 PXXXPPPXXHNRXPFXLXPTTVXPXLXNXPPPP-SGQXXXXPRTHXLXSLQYPXPXKXAX 647
P PPP NR + + L PPPP S P S P P + A
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 648 AXSYKHP--THPXXLSPXPXPPXXXXXXXXXXXXXXXSXXR--PPPXPLXXSXPD----- 800
+ + P + +S P PP + R PP P S P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 801 -PSSTXPRFHSXSXLXHHPPPXXAAXSPPSPXXHXXXPSXXXPXTSP 938
P S P + P P A +PP P P +P
Sbjct: 431 LPPSAPPSLPMGAPAA-PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = +1
Query: 481 RPPPXFTTXLLSXXXPXPXXXSSXTXLPPPPAXPXXXPXXTXXLP--SNIPXPXKXPXXX 654
RPPP + P SS + LPPPP P + LP P P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 655 PINTQXTPXXS 687
P + P S
Sbjct: 370 PSTGRQPPPLS 380
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPPXAXRXLPPXXPXXXXXPLPXXPXNLPQXPPRXPXTP 967
P PP PP P LP P PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = +2
Query: 770 PXXPXTIXPRSILNXXXXXXXXXXXXPPPPXAXRXLPPXXPXXXXXPLPXXPXNLPQXPP 949
P P I RS PP P P P P P P PP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 950 RXPXTP 967
P P
Sbjct: 449 LPPSAP 454
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.85
Identities = 30/149 (20%), Positives = 37/149 (24%)
Frame = +3
Query: 414 PXXXXPCALXPPPRXXHHXPXXXPPPXXHNRXPFXLXPTTVXPXLXNXPPPPSGQXXXXP 593
P P PPP H PPP H+ + P + PPP P
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEP 255
Query: 594 RTHXLXSLQYPXPXKXAXAXSYKHPTHPXXLSPXPXPPXXXXXXXXXXXXXXXSXXRPPP 773
H + P + H P P P PP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHH--EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 313
Query: 774 XPLXXSXPDPSSTXPRFHSXSXLXHHPPP 860
P+ + P H H PPP
Sbjct: 314 PPMHHEPGEHMPPPPMHHEPG--EHMPPP 340
Score = 29.5 bits (63), Expect = 0.85
Identities = 21/87 (24%), Positives = 26/87 (29%)
Frame = +3
Query: 414 PXXXXPCALXPPPRXXHHXPXXXPPPXXHNRXPFXLXPTTVXPXLXNXPPPPSGQXXXXP 593
P P PPP H PPP H+ + P + PPP P
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP-------P 328
Query: 594 RTHXLXSLQYPXPXKXAXAXSYKHPTH 674
H P P K ++ P H
Sbjct: 329 MHHEPGEHMPPPPFKHHELEEHEGPEH 355
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 7.9
Identities = 21/87 (24%), Positives = 26/87 (29%)
Frame = +3
Query: 438 LXPPPRXXHHXPXXXPPPXXHNRXPFXLXPTTVXPXLXNXPPPPSGQXXXXPRTHXLXSL 617
+ PPP H P PPP N P T + P P+ R +
Sbjct: 47 IPPPPSVDHSAPPSGPPPSYSN----SAAPATPAASASSAAPAPA-PAASQNRAYGAAPQ 101
Query: 618 QYPXPXKXAXAXSYKHPTHPXXLSPXP 698
YP P Y +P P P
Sbjct: 102 PYP-PQGGYPQQPYYYPNQPNYYPAQP 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,403,165
Number of Sequences: 5004
Number of extensions: 39526
Number of successful extensions: 160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 565779688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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