Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O22
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 284 1e-77
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 144 2e-35
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 140 3e-34
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 89 1e-18
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 66 8e-12
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 62 1e-10
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 61 2e-10
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 49 8e-07
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 38 0.002
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 34 0.031
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 4.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.2
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 284 bits (697), Expect = 1e-77
Identities = 156/258 (60%), Positives = 177/258 (68%), Gaps = 8/258 (3%)
Frame = +1
Query: 121 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 279
++++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G +D G E +
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 280 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 459
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVNNWD---DMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPK 113
Query: 460 PTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 639
KMTQI+FETFN+PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPH
Sbjct: 114 SNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPH 173
Query: 640 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEM-APXXA 816
AI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVR+IKEKLCYVALDFEQE+ +
Sbjct: 174 AIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQS 233
Query: 817 SXXSRSLRTPDGQVITIG 870
S +S PDGQVITIG
Sbjct: 234 SSLEKSYELPDGQVITIG 251
Score = 155 bits (376), Expect = 8e-39
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 IMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 425 VLLTEAPLNPKGQQ 466
LLTEAPLNPK +
Sbjct: 103 CLLTEAPLNPKSNR 116
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 144 bits (348), Expect = 2e-35
Identities = 69/134 (51%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
KM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + R
Sbjct: 118 KMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGR 177
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFE-QEMAPXXASXXS 828
LD+AGRD T YL+ +L +GY+F TA+ E VRE+KEKLCYV+ D E +
Sbjct: 178 LDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLM 237
Query: 829 RSLRTPDGQVITIG 870
R+ PDG+VI +G
Sbjct: 238 RNYTLPDGRVIKVG 251
Score = 75.8 bits (178), Expect = 8e-15
Identities = 29/63 (46%), Positives = 48/63 (76%)
Frame = +2
Query: 266 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 445
KD VGDEA++ R +L +KYP+E+GII ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 446 LNP 454
+NP
Sbjct: 110 MNP 112
Score = 46.8 bits (106), Expect = 4e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 133 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 231
A +V+DNG+G K G+A D+ PR FPSIVGRP
Sbjct: 4 APIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 140 bits (338), Expect = 3e-34
Identities = 65/134 (48%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
K+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI +
Sbjct: 123 KIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQ 182
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMAPXXASXXS- 828
++ GRD+TDYL L + G+ ++AE+EIVREIKEK CYVA DF E+
Sbjct: 183 EEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQI 242
Query: 829 RSLRTPDGQVITIG 870
+ + PD Q IT+G
Sbjct: 243 HTYQLPDNQTITLG 256
Score = 82.6 bits (195), Expect = 7e-17
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEH 421
VM QKD +VG EAQ+ RG+L ++ PIE GII NW DME+IW + + + +L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 422 PVLLTEAPL 448
P+LLTE PL
Sbjct: 107 PLLLTEPPL 115
Score = 52.8 bits (121), Expect = 6e-08
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 127 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 240
D + +DNGSG KAGFAGDD P+ +FP+ VGR +H+
Sbjct: 8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHE 45
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 88.6 bits (210), Expect = 1e-18
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 10/118 (8%)
Frame = +1
Query: 481 QIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALP 636
+IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY +
Sbjct: 144 EIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIG 203
Query: 637 HAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVREIKEKLCYVALDFEQEMA 804
+I + LAGRD+T ++ +L +R S TAER IKE+ CYV D +E +
Sbjct: 204 SSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFS 256
Score = 73.3 bits (172), Expect = 4e-14
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = +2
Query: 185 ATTRPAPSSRPSWVALATRXVMVGMGQK---DSYVGDEAQSKRGI-LTLKYPIEHGIITN 352
A++ PA SS+PS++A + D ++G++A K +L YPI HG I N
Sbjct: 42 ASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIEN 101
Query: 353 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 454
WD ME+ W + + LR PE+H LLTE PLNP
Sbjct: 102 WDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNP 135
Score = 40.7 bits (91), Expect = 3e-04
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 222
+++DNG+G K G+AG+DAP VFP+++
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 65.7 bits (153), Expect = 8e-12
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 5/253 (1%)
Frame = +1
Query: 61 AAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 240
A E + + PT + F+ +D+ LV+DNGS +AG+ G+ P+ VF ++V R
Sbjct: 5 AVREPVFSGPTPS---FQNVSNDIP-LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRY--- 57
Query: 241 GRDGRYGPERLLRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXX 420
RD + L G + S R+ + + DL +L
Sbjct: 58 -RDRKLSRTSTLVG---NDTLIEVGSRSIARSPFERNVI-SNWDLMEQVLDYTFLKLGID 112
Query: 421 XXXXXXXXXQP-QGPTGXK--MTQIMFETFNSPAMYVAIQAVLSLYASGR--TTGIVLDS 585
+P PT + MT+++FE +N+P++ I + S Y + + ++GIVL+
Sbjct: 113 RMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNL 172
Query: 586 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEK 765
G+ SH +P+ G + R+ G + YL+K+ + SF +
Sbjct: 173 GNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHD 232
Query: 766 LCYVALDFEQEMA 804
C+V+ D+ ++A
Sbjct: 233 HCHVSSDYTHDIA 245
Score = 42.7 bits (96), Expect = 7e-05
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 433
+ + + VG++ + G ++ + P E +I+NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 434 TEAPLNP 454
TE NP
Sbjct: 121 TEPLANP 127
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 61.7 bits (143), Expect = 1e-10
Identities = 28/77 (36%), Positives = 50/77 (64%)
Frame = +1
Query: 571 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 750
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 751 EIKEKLCYVALDFEQEM 801
EIKE +CYV+ +F+++M
Sbjct: 217 EIKESVCYVSQNFKEDM 233
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 60.9 bits (141), Expect = 2e-10
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Frame = +1
Query: 124 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGR--YGPERLLRG*RGPE 297
D+V+A+V+D GS + GF+G+D P+ V PS G + DGR +G E + + G E
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG----EFSDGRRLFGEEYIYKSNPGME 64
Query: 298 QERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTGXKM 477
+ + L +G + Q P+ K
Sbjct: 65 IKNAIRNGWVENWDVTVDLWRYGLEQ-----QLKTNPLEHPILITEPFDNPPENRV--KT 117
Query: 478 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 657
+ MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 118 LETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQH 177
Query: 658 LAGRDLTDYLMKILTERGY 714
+G + D L + L ++ +
Sbjct: 178 FSGNAINDILAQTLRDKNF 196
Score = 42.3 bits (95), Expect = 9e-05
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 311 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 454
+ +K I +G + NWD +W + +L+ P EHP+L+TE NP
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNP 110
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 49.2 bits (112), Expect = 8e-07
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 478 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 657
TQ FE P +A + ++ LYA G G+V+D G + PI +G + A +L
Sbjct: 166 TQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLP 225
Query: 658 LAGRDLTDYLMKILTE 705
L GR +T +L +L E
Sbjct: 226 LGGRYMTQHLQNLLRE 241
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 266 KDSYVGDEAQSKRGI--LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 439
++ YV DE Q I + +K +GII +W+ W +L+V P E+ +++TE
Sbjct: 49 RNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITE 108
Query: 440 APLNPK 457
NP+
Sbjct: 109 PSWNPQ 114
Score = 34.3 bits (75), Expect = 0.023
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 124 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 225
+++ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 33.9 bits (74), Expect = 0.031
Identities = 16/83 (19%), Positives = 41/83 (49%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
K+ I+F + + +++ + + +G + V+D G + + EG +P++ ++
Sbjct: 261 KILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIK 320
Query: 652 LDLAGRDLTDYLMKILTERGYSF 720
++ G D+T MK+L + +
Sbjct: 321 INYGGDDITLLFMKLLMRSHFPY 343
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 614 STKVTLCPTPSSVWTW 661
STK CP PS W W
Sbjct: 52 STKTATCPDPSWEWAW 67
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 349 GDDTVLDGVLQSEDTSLALGLVTHVGVFLAHTDHHXPG 236
GDD+VLD V +D L L AH D H G
Sbjct: 676 GDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAG 713
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,248,057
Number of Sequences: 5004
Number of extensions: 63359
Number of successful extensions: 235
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -