Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O22
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 310 1e-84
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 308 4e-84
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 308 5e-84
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 308 5e-84
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 308 5e-84
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 308 5e-84
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 308 5e-84
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 308 5e-84
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 285 3e-77
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 268 3e-72
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 241 6e-64
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 172 2e-43
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 146 1e-35
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 104 1e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 76 4e-14
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 45 8e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 45 8e-05
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 30 2.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.7
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 310 bits (760), Expect = 1e-84
Identities = 171/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 308 bits (756), Expect = 4e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 308 bits (755), Expect = 5e-84
Identities = 169/260 (65%), Positives = 183/260 (70%), Gaps = 8/260 (3%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERL 273
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 LRG*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQP 453
+ RG +YP + H + E + H
Sbjct: 61 SK--RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
Query: 454 QGPTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 633
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYAL
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYAL 172
Query: 634 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PX 810
PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Query: 811 XASXXSRSLRTPDGQVITIG 870
+S +S PDGQVIT+G
Sbjct: 233 SSSSLEKSYELPDGQVITVG 252
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 104 VLLTEAPLNPKANR 117
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 285 bits (699), Expect = 3e-77
Identities = 158/258 (61%), Positives = 177/258 (68%), Gaps = 8/258 (3%)
Frame = +1
Query: 121 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLR 279
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG +D G E +
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 280 G*RGPEQERYPHSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQG 459
RG +YP + H + E + H
Sbjct: 62 --RGILTLKYP---IEHGIVTNWD---DMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 113
Query: 460 PTGXKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 639
KMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPH
Sbjct: 114 SNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPH 173
Query: 640 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEM-APXXA 816
AI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVR+IKEKLCYVA DFE E+ A +
Sbjct: 174 AIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASS 233
Query: 817 SXXSRSLRTPDGQVITIG 870
S +S PDGQVITIG
Sbjct: 234 SSLEKSYELPDGQVITIG 251
Score = 159 bits (386), Expect = 2e-39
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 103 VLLTEAPLNPKSNR 116
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 268 bits (658), Expect = 3e-72
Identities = 151/242 (62%), Positives = 165/242 (68%), Gaps = 8/242 (3%)
Frame = +1
Query: 169 KAGFAGDDAPRAVFPSIVGRPRHQG-------RDGRYGPERLLRG*RGPEQERYPHSEVP 327
+AGFAGDDAPRAVFPSIVGRPRHQG +D G E + RG +YP +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK--RGILTLKYP---IE 59
Query: 328 HRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTGXKMTQIMFETFNS 507
H + E + H KMTQIMFETFN+
Sbjct: 60 HGIVTNWD---DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 508 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 687
PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYL
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 176
Query: 688 MKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PXXASXXSRSLRTPDGQVIT 864
MKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA +S +S PDGQVIT
Sbjct: 177 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT 236
Query: 865 IG 870
+G
Sbjct: 237 VG 238
Score = 159 bits (387), Expect = 2e-39
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 424
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 425 VLLTEAPLNPKGQQ 466
VLLTEAPLNPK +
Sbjct: 90 VLLTEAPLNPKANR 103
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 241 bits (589), Expect = 6e-64
Identities = 117/134 (87%), Positives = 124/134 (92%), Gaps = 1/134 (0%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILR
Sbjct: 75 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILR 134
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMA-PXXASXXS 828
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVR+IKEKLCYVALDFEQEMA +S
Sbjct: 135 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 194
Query: 829 RSLRTPDGQVITIG 870
+S PDGQVIT+G
Sbjct: 195 KSYELPDGQVITVG 208
Score = 158 bits (383), Expect = 6e-39
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +2
Query: 248 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 427
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 428 LLTEAPLNPKGQQ 466
LLTEAPLNPK +
Sbjct: 61 LLTEAPLNPKANR 73
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 172 bits (419), Expect = 2e-43
Identities = 100/252 (39%), Positives = 143/252 (56%), Gaps = 8/252 (3%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGRDGRYGPERLLRG*RGPEQERYP 312
+VVDNG+G K G+AG + P +FPS+VGRP R R G + L+ G + +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 313 HSEVPHRARYHHQLG*HGEDLAPHLLQXXXXXXXXXXXXXXXXXXQPQGPTGX-----KM 477
P + + + +D+A H+ + P KM
Sbjct: 69 DINYP----MDNGIVRNWDDMA-HVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKM 123
Query: 478 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 657
Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD
Sbjct: 124 FQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLD 183
Query: 658 LAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQ-EMAPXXASXXSRS 834
+AGRD+T YL+K+L +RGY+F +A+ E VR++KEKLCY+A D EQ E + S+
Sbjct: 184 IAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQ 243
Query: 835 LRTPDGQVITIG 870
PDG+VI +G
Sbjct: 244 YTLPDGRVIRLG 255
Score = 72.9 bits (171), Expect = 3e-13
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 361
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 362 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKGQQ 466
M +W HTF E L + P+E +LLTE PLNP +
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNR 120
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 146 bits (355), Expect = 1e-35
Identities = 66/105 (62%), Positives = 84/105 (80%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181
Query: 652 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALD 786
+DLAGRD+T+YL +L GY F + E EIVRE+KE CY+ALD
Sbjct: 182 MDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
Score = 95.5 bits (227), Expect = 4e-20
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 421
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 422 PVLLTEAPLNP 454
PVLLT+APLNP
Sbjct: 106 PVLLTDAPLNP 116
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +1
Query: 121 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 237
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 104 bits (249), Expect = 1e-22
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Frame = +1
Query: 481 QIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALP 636
+IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY +
Sbjct: 135 EIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIG 194
Query: 637 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEMAPXXA 816
I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 195 SCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYD- 253
Query: 817 SXXSRSLRTPDG 852
+ ++ LRT DG
Sbjct: 254 TDAAKWLRTYDG 265
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 421
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 422 PVLLTEAPLN 451
LLTE PLN
Sbjct: 116 FFLLTEPPLN 125
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 222
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 243
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 373
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 243
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 364
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 243
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 373
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 115 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 243
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 245 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 373
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/79 (40%), Positives = 55/79 (69%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
K+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++
Sbjct: 141 KLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVK 200
Query: 652 LDLAGRDLTDYLMKILTER 708
+ G +T+ L ++L ++
Sbjct: 201 CPIGGDLITEQLAQMLDQQ 219
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 329 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGQQ 466
++ G+I +W+ EKI H++ N L P EHPVL +E+ N + ++
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARR 139
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 124 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 222
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 472 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 651
++ QI E + + Q L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 291 ELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICS 349
Query: 652 LDLAGRDLTDYLMKILTERG---YSFTTTAEREIVREIKEKLCYVALDFEQE 798
+ + + D L L+ Y+F + E+ I+R E+ YV D+++E
Sbjct: 350 IPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +1
Query: 478 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 645
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 646 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEM 801
+R+D+ G+ LT+ L ++ R + E ++ E KE LC+V+ +F++ M
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 263 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 388
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +1
Query: 478 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 645
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 646 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVREIKEKLCYVALDFEQEM 801
+R+D+ G+ LT+ L ++ R + E ++ E KE LC+V+ +F++ M
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 263 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTF 388
+K +V E + +L Y PIE G + NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 596 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 501
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 146 STMAPACARPVSPATTRPAPSSRP 217
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 293 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 159
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 293 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 159
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 293 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 159
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 293 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 159
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 741 FPFSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 607
F +GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 293 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 180
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 311 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 159
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 603 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*KGNRS*NQGEALLCRP 782
++ +L++ S PR PP G + ++P+ DP G V+ + K + + E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 783 RLRAGDGT 806
+ AG T
Sbjct: 130 QTDAGKET 137
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 229 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 348
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 137 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 241
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,380,311
Number of Sequences: 27780
Number of extensions: 385154
Number of successful extensions: 1672
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -