Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O18
         (1317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08401-1|AAA28840.1|  408|Drosophila melanogaster prd-like homeo...    32   2.0  
AY121696-1|AAM52023.1|  408|Drosophila melanogaster RE68460p pro...    32   2.0  
AE014134-95|AAF51505.1|  408|Drosophila melanogaster CG3935-PA p...    32   2.0  

>L08401-1|AAA28840.1|  408|Drosophila melanogaster prd-like homeobox
            protein protein.
          Length = 408

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 1191 SPVASRAS-GPESQXPPPXXQXXPXPPXAXXXP 1286
            SPVA   S  P+ Q PPP  Q  P PP A   P
Sbjct: 340  SPVALTLSHSPQRQLPPPSHQAPPPPPRAATPP 372


>AY121696-1|AAM52023.1|  408|Drosophila melanogaster RE68460p protein.
          Length = 408

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 1191 SPVASRAS-GPESQXPPPXXQXXPXPPXAXXXP 1286
            SPVA   S  P+ Q PPP  Q  P PP A   P
Sbjct: 340  SPVALTLSHSPQRQLPPPSHQAPPPPPRAATPP 372


>AE014134-95|AAF51505.1|  408|Drosophila melanogaster CG3935-PA
            protein.
          Length = 408

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 1191 SPVASRAS-GPESQXPPPXXQXXPXPPXAXXXP 1286
            SPVA   S  P+ Q PPP  Q  P PP A   P
Sbjct: 340  SPVALTLSHSPQRQLPPPSHQAPPPPPRAATPP 372


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,474,998
Number of Sequences: 53049
Number of extensions: 324068
Number of successful extensions: 1763
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7150959855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)